Evidence map›Paper›PMID 24377867›Full record

ArticleJournal of genetics and genomics = Yi chuan xue bao2013

Very low-level heteroplasmy mtDNA variations are inherited in humans.

Yan Guo, Chung-I Li, Quanhu Sheng, Jeanette F Winther, Qiuyin Cai, John D Boice, Yu Shyr

Abstract read
In one paragraph

Article in Journal of genetics and genomics = Yi chuan xue bao, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Yan GuoVanderbilt Ingram Cancer Center, Center for Quantitative Sciences, Nashville, TN 37232, USA. Electronic address: yan.guo@vanderbilt.edu.
Chung-I LiDepartment of Applied Mathematics, Chiayi University (NCYU), Chiayi 60004, Taiwan, China.
Quanhu ShengVanderbilt Ingram Cancer Center, Center for Quantitative Sciences, Nashville, TN 37232, USA.
Jeanette F WintherInstitute of Cancer Epidemiology, Danish Cancer Society, Copenhagen DK-2100, Denmark.
Qiuyin CaiVanderbilt Epidemiology Center, Vanderbilt University School of Medicine, Nashville, TN 37232, USA.
John D BoiceNational Council on Radiation Protection & Measurements, Bethesda, MD 20814, USA.
Yu ShyrVanderbilt Ingram Cancer Center, Center for Quantitative Sciences, Nashville, TN 37232, USA. Electronic address: yu.shyr@vanderbilt.edu.

Funding

Tumor Immunology and Microenvironment Research ProgramP30CA068485 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI MATTHEW J TYSKA · 1995 to 2026
$172.8M
Genetic Consequences of Therapies for CancerR01CA104666 · NCI · VANDERBILT UNIVERSITY · PI BOICE, JOHN DUNNING · 2005 to 2009
$3.0M
NCI NIH HHS P30 CA068485NCI NIH HHS P30 CA68485NCI NIH HHS R01 CA104666
6 · The paper itself

Abstract

Little is known about the inheritance of very low heteroplasmy mitochondria DNA (mtDNA) variations. Even with the development of new next-generation sequencing methods, the practical lower limit of measured heteroplasmy is still about 1% due to the inherent noise level of the sequencing. In this study, we sequenced the mitochondrial genome of 44 individuals using Illumina high-throughput sequencing technology and obtained high-coverage mitochondria sequencing data. Our study population contains many mother-offspring pairs. This unique study design allows us to bypass the usual heteroplasmy limitation by analyzing the correlation of mutation levels at each position in the mtDNA sequence between maternally related pairs and non-related pairs. The study showed that very low heteroplasmy variants, down to almost 0.1%, are inherited maternally and that this inheritance begins to decrease at about 0.5%, corresponding to a bottleneck of about 200 mtDNA.

Indexed as

Genetic VariationDNA, MitochondrialHigh-Throughput Nucleotide SequencingHumansInheritance PatternsMothersMutationSequence Analysis, DNADNA, MitochondrialBottleneckHeteroplasmyHigh-depth sequencingMaternal inheritancemtDNA mutationsNext-generation sequencing

Identifiers

PMID24377867
PMCPMC4149221

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.