Evidence map›Paper›PMID 24377372›Full record

ArticleEmerging infectious diseases2014

Genetic variation of Vibrio cholerae during outbreaks, Bangladesh, 2010-2011.

Shah M Rashed, Andrew S Azman, Munirul Alam, Shan Li, David A Sack, J Glenn Morris, Ira Longini, Abul Kasem Siddique, Anwarul Iqbal, Anwar Huq and 3 more

Abstract readHistorical Article
In one paragraph

Article in Emerging infectious diseases, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Shah M Rashed
Andrew S Azman
Munirul Alam
Shan Li
David A Sack
J Glenn Morris
Ira Longini
Abul Kasem Siddique
Anwarul Iqbal
Anwar Huq
Rita R Colwell
R Bradley Sack
O Colin Stine

Funding

EPIDEMIOLOGY &ECOLOGY OF VIBRIO CHOLERAE IN BANGLADESHR01AI039129 · NIAID · JOHNS HOPKINS UNIVERSITY · PI SACK, DAVID A · 1996 to 2014
$15.2M
Cholera Transmission in Gressier Region, HaitiR01AI097405 · NIAID · UNIVERSITY OF FLORIDA · PI MORRIS, JOHN GLENN · 2012 to 2015
$2.7M
NIAID NIH HHS R01 AI039129NIAID NIH HHS R01 AI097405NIAID NIH HHS R0-1AI097405PHS HHS R01-1A1039129
6 · The paper itself

Abstract

Cholera remains a major public health problem. To compare the relative contribution of strains from the environment with strains isolated from patients during outbreaks, we performed multilocus variable tandem repeat analyses on samples collected during the 2010 and 2011 outbreak seasons in 2 geographically distinct areas of Bangladesh. A total of 222 environmental and clinical isolates of V. cholerae O1 were systematically collected from Chhatak and Mathbaria. In Chhatak, 75 of 79 isolates were from the same clonal complex, in which extensive differentiation was found in a temporally consistent pattern of successive mutations at single loci. A total of 59 isolates were collected from 6 persons; most isolates from 1 person differed by sequential single-locus mutations. In Mathbaria, 60 of 84 isolates represented 2 separate clonal complexes. The small number of genetic lineages in isolates from patients, compared with those from the environment, is consistent with accelerated transmission of some strains among humans during an outbreak.

Indexed as

Disease OutbreaksGenetic VariationBangladeshCholeraGenotypeHistory, 21st CenturyHumansMinisatellite RepeatsMultilocus Sequence TypingSeasonsVibrio choleraebacteriaBangladeshcholerainfectious disease outbreaksmultilocus sequence analysisoutbreakVibrio cholerae

Identifiers

PMID24377372
PMCPMC3884724

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.