Evidence map›Paper›PMID 24376912›Full record

ArticleRSC advances2013

Circular Permutation of the Trp-cage: Fold Rescue upon Addition of a Hydrophobic Staple.

Aimee Byrne, Brandon L Kier, D V Williams, Michele Scian, Niels H Andersen

Abstract read
In one paragraph

Article in RSC advances, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Interplay between CChembiochem : a European journal of chemical biology · 2025
    Article
  3. Design and Engineering of Miniproteins.ACS bio & med chem Au · 2022
    Review
  4. Article
  5. Stapled Peptides Inhibitors: A New Window for Target Drug Discovery.Computational and structural biotechnology journal · 2019
    Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Aimee ByrneDepartment of Chemistry, University of Washington Seattle, Washington, 98195, USA andersen@chem.washington.edu.
Brandon L KierDepartment of Chemistry, University of Washington Seattle, Washington, 98195, USA andersen@chem.washington.edu.
D V WilliamsDepartment of Chemistry, University of Washington Seattle, Washington, 98195, USA andersen@chem.washington.edu.
Michele ScianDepartment of Chemistry, University of Washington Seattle, Washington, 98195, USA andersen@chem.washington.edu.
Niels H AndersenDepartment of Chemistry, University of Washington Seattle, Washington, 98195, USA andersen@chem.washington.edu.

Funding

TRAINING IN MOLECULAR BIOPHYSICST32GM008268 · NIGMS · UNIVERSITY OF WASHINGTON · PI KOLLMAN, JUSTIN M, ZHENG, NING · 1988 to 2023
$8.6M
Acquisition of a 800 MHz NMR SpectrometerS10RR029217 · NCRR · UNIVERSITY OF WASHINGTON · PI DROBNY, GARY PETER · 2010 to 2010
$2.7M
Exploring Protein Folding Landscapes by Circular PermutationR01GM099889 · NIGMS · UNIVERSITY OF WASHINGTON · PI ANDERSEN, NIELS HJORTH · 2012 to 2015
$1.0M
NCRR NIH HHS S10 RR029217NIGMS NIH HHS R01 GM099889NIGMS NIH HHS T32 GM008268
6 · The paper itself

Abstract

The Trp-cage, at 20 residues in length, is generally acknowledged as the smallest fully protein-like folding motif. Linking the termini by a two-residue unit and excising one residue affords circularly permuted sequences that adopt the same structure. This represents the first successful circular permutation of any fold of less than 50-residue length. As was observed for the original topology, a hydrophobic staple near the chain termini is required for enhanced fold stability.

Identifiers

PMID24376912
PMCPMC3870897

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.