Evidence map›Paper›PMID 24376879›Full record

ArticlePloS one2013

Trx2p-dependent regulation of Saccharomyces cerevisiae oxidative stress response by the Skn7p transcription factor under respiring conditions.

Rocío Gómez-Pastor, Elena Garre, Roberto Pérez-Torrado, Emilia Matallana

Abstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. The regulatory network ofMicrobiology spectrum · 2025
    Article
  2. Review
  3. Oxidative stress response pathways in fungi.Cellular and molecular life sciences : CMLS · 2022
    Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Rocío Gómez-PastorDepartament de Bioquímica i Biologia Molecular, Universitat de València, Valencia, Spain.
Elena GarreDepartament de Bioquímica i Biologia Molecular, Universitat de València, Valencia, Spain.
Roberto Pérez-TorradoDepartamento de Biotecnología, Instituto de Agroquímica y Tecnología de Alimentos, CSIC, 7 Paterna, Valencia, Spain.
Emilia MatallanaDepartament de Bioquímica i Biologia Molecular, Universitat de València, Valencia, Spain ; Departamento de Biotecnología, Instituto de Agroquímica y Tecnología de Alimentos, CSIC, 7 Paterna, Valencia, Spain.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The whole genome analysis has demonstrated that wine yeasts undergo changes in promoter regions and variations in gene copy number, which make them different to lab strains and help them better adapt to stressful conditions during winemaking, where oxidative stress plays a critical role. Since cytoplasmic thioredoxin II, a small protein with thiol-disulphide oxidoreductase activity, has been seen to perform important functions under biomass propagation conditions of wine yeasts, we studied the involvement of Trx2p in the molecular regulation of the oxidative stress transcriptional response on these strains. In this study, we analyzed the expression levels of several oxidative stress-related genes regulated by either Yap1p or the co-operation between Yap1p and Skn7p. The results revealed a lowered expression for all the tested Skn7p dependent genes in a Trx2p-deficient strain and that Trx2p is essential for the oxidative stress response during respiratory metabolism in wine yeast. Additionally, activity of Yap1p and Skn7p dependent promoters by β-galactosidase assays clearly demonstrated that Skn7p-dependent promoter activation is affected by TRX2 gene deficiency. Finally we showed that deleting the TRX2 gene causes Skn7p hyperphosphorylation under oxidative stress conditions. We propose Trx2p to be a new positive efector in the regulation of the Skn7p transcription factor that controls phosphorylation events and, therefore, modulates the oxidative stress response in yeast.

Indexed as

Base Sequencebeta-GalactosidaseBlotting, WesternCatalaseDNA-Binding ProteinsDNA PrimersGene DeletionGene Expression Regulation, FungalImmunoprecipitationMolecular Sequence DataOxidative StressPlasmidsPolymerase Chain ReactionSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsThioredoxinsbeta-GalactosidaseCatalaseDNA-Binding ProteinsDNA PrimersSaccharomyces cerevisiae ProteinsSKN7 protein, S cerevisiaeThioredoxinsTranscription FactorsTRX2 protein, S cerevisiaeYAP1 protein, S cerevisiae

Identifiers

PMID24376879
PMCPMC3871606

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.