ArticleJournal of mathematical biology2014
An algebraic view of bacterial genome evolution.
Article in Journal of mathematical biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.
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6 citing papers in PubMed, 21 citations in OpenAlex.
- Genome rearrangements as double coset Markov chains.Journal of mathematical biology · 2026Article
- Rearrangement Events on Circular Genomes.Bulletin of mathematical biology · 2023Article
- A new algebraic approach to genome rearrangement models.Journal of mathematical biology · 2022Article
- A mean first passage time genome rearrangement distance.Journal of mathematical biology · 2020Article
- A Path-Deformation Framework for Determining Weighted Genome Rearrangement Distance.Frontiers in genetics · 2020Article
- Algebraic double cut and join : A group-theoretic approach to the operator on multichromosomal genomes.Journal of mathematical biology · 2015Article
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1 author at 1 institution in 1 country.
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Abstract
Rearrangements of bacterial chromosomes can be studied mathematically at several levels, most prominently at a local, or sequence level, as well as at a topological level. The biological changes involved locally are inversions, deletions, and transpositions, while topologically they are knotting and catenation. These two modelling approaches share some surprising algebraic features related to braid groups and Coxeter groups. The structural approach that is at the core of algebra has long found applications in sciences such as physics and analytical chemistry, but only in a small number of ways so far in biology. And yet there are examples where an algebraic viewpoint may capture a deeper structure behind biological phenomena. This article discusses a family of biological problems in bacterial genome evolution for which this may be the case, and raises the prospect that the tools developed by algebraists over the last century might provide insight to this area of evolutionary biology.
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