ArticleJournal of genetics2013
Identification and expression analysis of primary auxin-responsive Aux/IAA gene family in cucumber (Cucumis sativus).
Article in Journal of genetics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.
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Who cites it
22 citing papers in PubMed, 60 citations in OpenAlex.
- Evolutionary and functional analysis of ARF and Aux/IAA gene families reveals their roles in sugar metabolism and watermelon domestication.Frontiers in plant science · 2026Article
- Systematic analysis of the Aux/IAA gene family in pineapple reveals insights into their structural diversity, expression dynamics, and interaction networks.BMC plant biology · 2025Article
- Genome-Wide Identification and Expression Analysis of the Aux/IAA Gene Family in Lettuce (International journal of molecular sciences · 2025Article
- Transcriptome Reveals the Regulation of Exogenous Auxin Inducing Rooting of Non-Rooting Callus of Tea Cuttings.International journal of molecular sciences · 2024Article
- Genome-wide characterization, functional analysis, and expression profiling of the Aux/IAA gene family in spinach.BMC genomics · 2024Article
- Effects of PmaIAA27 and PmaARF15 genes on drought stress tolerance in pinus massoniana.BMC plant biology · 2023Article
- Genome-wide identification and expression analysis of the AUX/IAA gene family in turnip (Brassica rapa ssp. rapa).BMC plant biology · 2023Article
- Regulatory Mechanisms ofGenes · 2023Article
- Article
- Genome-Wide Identification and Expression Analysis of the Aux/IAA and Auxin Response Factor Gene Family inInternational journal of molecular sciences · 2021Article
- Transcriptomes analysis reveals novel insight into the molecular mechanisms of somatic embryogenesis in Hevea brasiliensis.BMC genomics · 2021Article
- Genome-Wide Analysis of the Auxin/Indoleacetic Acid Gene Family and Response to Indole-3-Acetic Acid Stress in Tartary Buckwheat (International journal of genomics · 2021Article
- Article
- Genome-wide characterization and expression analyses of the auxin/indole-3-acetic acid (Aux/IAA) gene family in barley (Hordeum vulgare L.).Scientific reports · 2020Article
- Identification and bioinformatic analysis ofBioengineered · 2019Article
- Genome-wide identification of the auxin/indole-3-acetic acid (Aux/IAA) gene family in pepper, its characterisation, and comprehensive expression profiling under environmental and phytohormones stress.Scientific reports · 2018Article
- Genome-Wide Identification and Expression Analyses of the Fibrillin Family Genes Suggest Their Involvement in Photoprotection in Cucumber.Plants (Basel, Switzerland) · 2018Article
- Aux/IAA Gene Family in Plants: Molecular Structure, Regulation, and Function.International journal of molecular sciences · 2018Review
- Evolution Analysis of the Aux/IAA Gene Family in Plants Shows Dual Origins and Variable Nuclear Localization Signals.International journal of molecular sciences · 2017Article
- Genetic Analysis and QTL Mapping of Fruit Peduncle Length in Cucumber (Cucumis sativus L.).PloS one · 2016Article
Corrections and comments
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Authors and funding
5 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Aux/IAA is an important gene family involved in many aspects of growth and development. Aux/IAA proteins are short-lived nuclear proteins that are induced primarily by various phytohormones. In this study, 29 Aux/IAA family genes (CsIAA01-CsIAA29) were identified and characterized in cucumber, including gene structures, phylogenetic relationships, conserved protein motifs and chromosomal locations. These genes show distinct organizational patterns of their putative motifs. The distributions of the genes vary: except for five CsIAA genes in cucumber that were not located, seven CsIAA genes were found on scaffold, while the other 17 CsIAA genes were distributed on seven other chromosomes. Based on a phylogenetic analysis of the Aux/IAA protein sequences from cucumber, Arabidopsis and other plants, the Aux/IAA genes in cucumber were categorized into seven subfamilies. To investigate whether the expression of CsIAA genes is associated with auxin induction, their transcript levels were monitored in seedlings treated with IAA (indole-3-acetic acid), and their expression patterns were analysed by semiquantitative reverse transcription-polymerase chain reaction (RT-PCR). The results showed that 11/29 CsIAA genes were expressed in leaves whether treated with IAA or not and the time course of processing and compared with the control, five CsIAA genes showed low expression only after 60 min treatment with IAA, while 11 genes showed no expression. These results provide useful information for further functional analysis of Aux/IAA gene family in cucumber.
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