Evidence map›Paper›PMID 24371000›Full record

ArticleJournal of fluorescence2014

Fluorescence Investigation of Interactions Between Novel Benzanthrone Dyes and Lysozyme Amyloid Fibrils.

Kateryna Vus, Valeriya Trusova, Galyna Gorbenko, Rohit Sood, Elena Kirilova, Georgiy Kirilov, Inta Kalnina, Paavo Kinnunen

Abstract read
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In one paragraph

Article in Journal of fluorescence, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.7field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 3 countries.

Kateryna VusDepartment of Biological and Medical Physics, V.N. Karazin Kharkiv National University, 4 Svobody Sq, 61022, Kharkiv, Ukraine. katenka_vus@mail.ru.
Valeriya TrusovaDepartment of Biological and Medical Physics, V.N. Karazin Kharkiv National University, 4 Svobody Sq, 61022, Kharkiv, Ukraine.
Galyna GorbenkoDepartment of Biological and Medical Physics, V.N. Karazin Kharkiv National University, 4 Svobody Sq, 61022, Kharkiv, Ukraine.
Rohit SoodDepartment of Biomedical Engineering and Computational Science, School of Science and Technology, Aalto University, Otakaari 3, FI-00076, Espoo, Finland.
Elena KirilovaDepartment of Chemistry and Geography, Faculty of Natural Sciences and Mathematics, Daugavpils University, Vienibas 13, LV5401, Daugavpils, Latvia.
Georgiy KirilovDepartment of Chemistry and Geography, Faculty of Natural Sciences and Mathematics, Daugavpils University, Vienibas 13, LV5401, Daugavpils, Latvia.
Inta KalninaDepartment of Chemistry and Geography, Faculty of Natural Sciences and Mathematics, Daugavpils University, Vienibas 13, LV5401, Daugavpils, Latvia.
Paavo KinnunenDepartment of Biomedical Engineering and Computational Science, School of Science and Technology, Aalto University, Otakaari 3, FI-00076, Espoo, Finland.
Daugavpils University · LVAalto University · FIV. N. Karazin Kharkiv National University · UA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A series of novel fluorescent benzanthrone dyes have been tested for their ability to identify and characterize fibrillar aggregates of lysozyme prepared by protein denaturation in concentrated ethanol solution (F(eth)) or acidic buffer (F(ac)). Quantitative parameters of the dye association with native and fibrillar protein have been derived from the results of fluorimetric titration. The binding characteristics proved to be different for F(eth)- and F(ac)-bound benzanthrones, highlighting the dye sensitivity to the distinctions in fibril morphology. By comparing the dye preference to fibrillar protein aggregates, AM2, A8 and A6 were selected as the most prospective amyloid tracers. Based on the analysis of red edge excitation shifts and fluorescence lifetimes of the amyloid-bound dyes it was assumed that surface grooves or dry "steric zipper" interface are potential fibril binding sites for the novel fluorophores.

Indexed as

AmyloidBenz(a)AnthracenesBenzothiazolesColoring AgentsMicroscopy, Electron, TransmissionMuramidaseSpectrometry, FluorescenceThiazolesAmyloidBenz(a)AnthracenesbenzanthroneBenzothiazolesColoring AgentsMuramidaseThiazolesthioflavin TAmyloid markerBenzanthrone dyesFibrillar lysozymePolarity

Identifiers

PMID24371000
OpenAlexW1972279271

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.