Evidence map›Paper›PMID 24369434›Full record

ArticlePlant & cell physiology2014

BEX1/ARF1A1C is required for BFA-sensitive recycling of PIN auxin transporters and auxin-mediated development in Arabidopsis.

Hirokazu Tanaka, Tomasz Nodzyłski, Saeko Kitakura, Mugurel I Feraru, Michiko Sasabe, Tomomi Ishikawa, Jürgen Kleine-Vehn, Tatsuo Kakimoto, Jiři Friml

Open access · hybridAbstract read
In one paragraph

Article in Plant & cell physiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
6.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 66 citations in OpenAlex.

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  16. The PIN-FORMED Auxin Efflux Carriers in Plants.International journal of molecular sciences · 2018
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 3 countries.

Hirokazu TanakaDepartment of Biological Sciences, Graduate School of Science, Osaka University, Osaka, 560-0043 Japan.
Tomasz Nodzyłski
Saeko Kitakura
Mugurel I Feraru
Michiko Sasabe
Tomomi Ishikawa
Jürgen Kleine-Vehn
Tatsuo Kakimoto
Jiři Friml
Osaka University · JPBOKU University · ATCentral European Institute of Technology · CZCentral European Institute of Technology – Masaryk University · CZHirosaki University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Correct positioning of membrane proteins is an essential process in eukaryotic organisms. The plant hormone auxin is distributed through intercellular transport and triggers various cellular responses. Auxin transporters of the PIN-FORMED (PIN) family localize asymmetrically at the plasma membrane (PM) and mediate the directional transport of auxin between cells. A fungal toxin, brefeldin A (BFA), inhibits a subset of guanine nucleotide exchange factors for ADP-ribosylation factor small GTPases (ARF GEFs) including GNOM, which plays a major role in localization of PIN1 predominantly to the basal side of the PM. The Arabidopsis genome encodes 19 ARF-related putative GTPases. However, ARF components involved in PIN1 localization have been genetically poorly defined. Using a fluorescence imaging-based forward genetic approach, we identified an Arabidopsis mutant, bfa-visualized exocytic trafficking defective1 (bex1), in which PM localization of PIN1-green fluorescent protein (GFP) as well as development is hypersensitive to BFA. We found that in bex1 a member of the ARF1 gene family, ARF1A1C, was mutated. ARF1A1C localizes to the trans-Golgi network/early endosome and Golgi apparatus, acts synergistically to BEN1/MIN7 ARF GEF and is important for PIN recycling to the PM. Consistent with the developmental importance of PIN proteins, functional interference with ARF1 resulted in an impaired auxin response gradient and various developmental defects including embryonic patterning defects and growth arrest. Our results show that ARF1A1C is essential for recycling of PIN auxin transporters and for various auxin-dependent developmental processes.

Indexed as

ADP-Ribosylation FactorsAllelesAmino Acid SequenceArabidopsisArabidopsis ProteinsBiological TransportBrefeldin ACloning, MolecularEndocytosisEpistasis, GeneticGreen Fluorescent ProteinsGuanine Nucleotide Exchange FactorsIndoleacetic AcidsIntracellular SpaceMembrane Transport ProteinsMolecular Sequence DataADP-Ribosylation FactorsArabidopsis ProteinsBrefeldin AGreen Fluorescent ProteinsGuanine Nucleotide Exchange FactorsIndoleacetic AcidsMembrane Transport ProteinsPIN1 protein, ArabidopsisArabidopsis thalianaAuxinEmbryogenesisExocytosisPIN-FORMED

Identifiers

PMID24369434
PMCPMC3982122
OpenAlexW2128339875

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.