Evidence map›Paper›PMID 24368729›Full record

ArticleeLife2013

PI3K/Akt1 signalling specifies foregut precursors by generating regionalized extra-cellular matrix.

S Nahuel Villegas, Michaela Rothová, Martin E Barrios-Llerena, Maria Pulina, Anna-Katerina Hadjantonakis, Thierry Le Bihan, Sophie Astrof, Joshua M Brickman

Abstract read
In one paragraph

Article in eLife, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. The Organizer and Its Signaling in Embryonic Development.Journal of developmental biology · 2021
    Review
  7. Article
  8. Article
  9. PI3K in stemness regulation: from development to cancer.Biochemical Society transactions · 2020
    Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Orchestrating liver development.Development (Cambridge, England) · 2015
    Review
  18. Gutsy moves in mice: cellular and molecular dynamics of endoderm morphogenesis.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2014
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

S Nahuel VillegasInstitute for Stem Cell Research, MRC Centre for Regenerative Medicine, University of Edinburgh, Edinburgh, United Kingdom.
Michaela Rothová
Martin E Barrios-Llerena
Maria Pulina
Anna-Katerina Hadjantonakis
Thierry Le Bihan
Sophie Astrof
Joshua M Brickman

Funding

Role of integrin a5 in the development of aortic arch arteries.R01HL103920 · NHLBI · WEILL MEDICAL COLL OF CORNELL UNIV · PI ASTROF, SOPHIE · 2010 to 2024
$5.7M
Morphogenesis of mammalian gut endodermR01DK084391 · NIDDK · SLOAN-KETTERING INST CAN RESEARCH · PI HADJANTONAKIS, ANNA-KATERINA · 2009 to 2018
$4.1M
Biotechnology and Biological Sciences Research Council BB/D019621/1Medical Research Council G0701428NHLBI NIH HHS R01 HL103920NIDDK NIH HHS R01 DK084391NIDDK NIH HHS R01-DK084391
6 · The paper itself

Abstract

During embryonic development signalling pathways act repeatedly in different contexts to pattern the emerging germ layers. Understanding how these different responses are regulated is a central question for developmental biology. In this study, we used mouse embryonic stem cell (mESC) differentiation to uncover a new mechanism for PI3K signalling that is required for endoderm specification. We found that PI3K signalling promotes the transition from naïve endoderm precursors into committed anterior endoderm. PI3K promoted commitment via an atypical activity that delimited epithelial-to-mesenchymal transition (EMT). Akt1 transduced this activity via modifications to the extracellular matrix (ECM) and appropriate ECM could itself induce anterior endodermal identity in the absence of PI3K signalling. PI3K/Akt1-modified ECM contained low levels of Fibronectin (Fn1) and we found that Fn1 dose was key to specifying anterior endodermal identity in vivo and in vitro. Thus, localized PI3K activity affects ECM composition and ECM in turn patterns the endoderm. DOI: http://dx.doi.org/10.7554/eLife.00806.001.

Indexed as

Cell DifferentiationAnimalsCell LineageCells, CulturedCoculture TechniquesEmbryo Culture TechniquesEmbryonic Stem CellsEndodermEpithelial CellsEpithelial-Mesenchymal TransitionExtracellular MatrixFibroblast Growth FactorsFibronectinsGastrointestinal TractMiceMorphogenesisAkt1 protein, mouseFibroblast Growth FactorsFibronectinsPhosphatidylinositol 3-KinaseProto-Oncogene Proteins c-aktendodermextracellular matrixFibronectinforegutPI3K/Akt1proteomics

Identifiers

PMID24368729
PMCPMC3871052

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.