Evidence map›Paper›PMID 24368703›Full record

ArticleAmerican journal of physiology. Gastrointestinal and liver physiology2014

Inhibition of Notch signaling reduces the number of surviving Dclk1+ reserve crypt epithelial stem cells following radiation injury.

Dongfeng Qu, Randal May, Sripathi M Sureban, Nathaniel Weygant, Parthasarathy Chandrakesan, Naushad Ali, Linheng Li, Terrence Barrett, Courtney W Houchen

Abstract read
In one paragraph

Article in American journal of physiology. Gastrointestinal and liver physiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 37 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Review
  5. Review
  6. Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Cellular Plasticity of Defa4Cellular and molecular gastroenterology and hepatology · 2019
    Article
  13. Article
  14. Role of ADAM10 in intestinal crypt homeostasis and tumorigenesis.Biochimica et biophysica acta. Molecular cell research · 2017
    Review
  15. Roles of Wnt Target Genes in the Journey of Cancer Stem Cells.International journal of molecular sciences · 2017
    Review
  16. Article
  17. Review
  18. Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Dongfeng QuDepartment of Medicine, University of Oklahoma Health Science Center, Oklahoma City, Oklahoma;
Randal May
Sripathi M Sureban
Nathaniel Weygant
Parthasarathy Chandrakesan
Naushad Ali
Linheng Li
Terrence Barrett
Courtney W Houchen
University of Oklahoma Health Sciences Center · USOklahoma State University Oklahoma City · USNorthwestern University · USStowers Institute for Medical Research · US

Funding

Intestinal Stem Cell Consortium Coordinating CenterU01DK085532 · NIDDK · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI NILAND, JOYCE CAROL · 2009 to 2018
$6.5M
Isolation and Characterization of Intestinal Stem CellsU01DK085507 · NIDDK · STOWERS INSTITUTE FOR MEDICAL RESEARCH · PI LI, LINHENG · 2009 to 2023
$6.2M
Limited Competition for the Continuation of the Intestinal Stem Cell Consortium Coordinating CenterU24DK085532 · NIDDK · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI NILAND, JOYCE CAROL · 2019 to 2023
$2.3M
Isolation and Characterization of Intestinal Stem Cells Using Novel Markers (RP)U01DK085508 · NIDDK · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI HOUCHEN, COURTNEY WAYNE · 2009 to 2014
$2.0M
The Gastrointestinal Stem Cell Response to InjuryI01BX001952 · VA · OKLAHOMA CITY VA MEDICAL CENTER · PI HOUCHEN, COURTNEY WAYNE · 2014 to 2017
–
BLRD VA I01 BX001952NIDDK NIH HHS U01 DK085507NIDDK NIH HHS U01 DK-085508NIDDK NIH HHS U01 DK085532NIDDK NIH HHS U24 DK085532
6 · The paper itself

Abstract

We have previously reported that doublecortin-like kinase 1 (Dclk1) is a putative intestinal stem cell (ISC) marker. In this report, we evaluated the use of Dclk1 as a marker of surviving ISCs in response to treatment with high-dose total body irradiation (TBI). Both apoptotic and mitotic Dclk1(+) cells were observed 24 h post-TBI associated with a corresponding loss of intestinal crypts observed at 84 h post-TBI. Although the Notch signaling pathway plays an important role in regulating proliferation and lineage commitment within the intestine, its role in ISC function in response to severe genotoxic injury is not yet fully understood. We employed the microcolony assay to functionally assess the effects of Notch inhibition with difluorophenacetyl-l-alanyl-S-phenylglycine t-butyl ester (DAPT) on intestinal crypt stem cell survival following severe (>8 Gy) radiation injury. Following treatment with DAPT, we observed a nearly 50% reduction in the number of surviving Dclk1(+) crypt epithelial cells at 24 h after TBI and similar reduction in the number of surviving small intestinal crypts at 84 h. These data indicate that inhibition of Notch signaling decreases ISC survival following radiation injury, suggesting that the Notch signaling pathway plays an important role in ISC-mediated crypt regeneration. These results also suggest that crypt epithelial cell Dclk1 expression can be used as one potential marker to evaluate the early survival of ISCs following severe radiation injury.

Indexed as

AnimalsBiomarkersDoublecortin-Like KinasesEpithelial CellsFemaleGene Expression RegulationIntestinal MucosaMiceMice, Inbred C57BLProtein Serine-Threonine KinasesReceptors, NotchRNA, MessengerSignal TransductionStem CellsWhole-Body IrradiationBiomarkersDclk1 protein, mouseDoublecortin-Like KinasesProtein Serine-Threonine KinasesReceptors, NotchRNA, Messengercrypt survivaldoublecortin-like kinase 1radiation

Identifiers

PMID24368703
PMCPMC3949020
OpenAlexW2159549248

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.