Evidence map›Paper›PMID 24368180›Full record

ArticleBiochemical and biophysical research communications2014

Distal NF-kB binding motif functions as an enhancer for nontypeable H. influenzae-induced DEFB4 regulation in epithelial cells.

Jeong-Im Woo, Sung-Hee Kil, Huiqi Pan, Yoo Jin Lee, David J Lim, Sung K Moon

Abstract read
In one paragraph

Article in Biochemical and biophysical research communications, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
  2. Panel 4: Report of the Microbiology Panel.Otolaryngology--head and neck surgery : official journal of American Academy of Otolaryngology-Head and Neck Surgery · 2017
    Review
  3. Article
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Jeong-Im WooDepartment of Head & Neck Surgery, David Geffen School of Medicine, University of California, Los Angeles, CA, USA.
Sung-Hee KilDepartment of Head & Neck Surgery, David Geffen School of Medicine, University of California, Los Angeles, CA, USA.
Huiqi PanHouse Research Institute, Los Angeles, CA, USA.
Yoo Jin LeeDepartment of Head & Neck Surgery, David Geffen School of Medicine, University of California, Los Angeles, CA, USA.
David J LimDepartment of Head & Neck Surgery, David Geffen School of Medicine, University of California, Los Angeles, CA, USA.
Sung K MoonDepartment of Head & Neck Surgery, David Geffen School of Medicine, University of California, Los Angeles, CA, USA. Electronic address: skmoon@mednet.ucla.edu.
House Clinic · US

Funding

Innate Immunity in Otitis Media PathogenesisR01DC005025 · NIDCD · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI LIM, DAVID J. · 2001 to 2013
$4.1M
Role of Spiral Ligament Fibrocytes in Immune-Mediated Inner Ear DamageR33DC011862 · NIDCD · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI LIM, DAVID J. · 2013 to 2015
$1.3M
Role of Spiral Ligament Fibrocytes in Immune-Mediated Inner Ear DamageR21DC011862 · NIDCD · HOUSE RESEARCH INSTITUTE · PI LIM, DAVID J. · 2011 to 2012
$492k
NIDCD NIH HHS DC005025NIDCD NIH HHS DC011862NIDCD NIH HHS R01 DC005025NIDCD NIH HHS R21 DC011862NIDCD NIH HHS R33 DC011862
6 · The paper itself

Abstract

Among the antimicrobial molecules produced by epithelial cells, DEFB4 is inducible in response to proinflammatory signals such as cytokines and bacterial molecules. Nontypeable Haemophilus influenzae (NTHi) is an important human pathogen that exacerbates chronic obstructive pulmonary disease in adult and causes otitis media and sinusitis in children. Previously, we have demonstrated that DEFB4 effectively kills NTHi and is induced by NTHi via TLR2 signaling. The 5'-flanking region of DEFB4 contains several NF-κB binding motifs, but their NTHi-specific activity remains unclear. In this study, we aimed to elucidate molecular mechanism involved in DEFB4 regulation, focusing on the role of the distal NF-κB binding motif of DEFB4 responding to NTHi. Here, we show that the human middle ear epithelial cells up-regulate DEFB4 expression in response to NTHi via NF-κB activation mediated by IκKα/β-IκBα signaling. Deletion of the distal NF-κB binding motif led to a significant reduction in NTHi-induced DEFB4 up-regulation. A heterologous construct containing the distal NF-κB binding motif was found to increase the promoter activity in response to NTHi, indicating a NTHi-responding enhancer activity of the distal NF-κB binding motif. Furthermore, electrophoretic mobility shift assays and chromatin immunoprecipitation assays showed that the p65 domain of NF-κB binds to the distal NF-κB binding motif in response to NTHi. Taken together, our results suggest that NTHi-induced binding of p65 NF-κB to the distal NF-κB binding motif of DEFB4 enhances NTHi-induced DEFB4 regulation in epithelial cells.

Indexed as

AdultBacterial Typing TechniquesBase Sequencebeta-DefensinsBinding SitesEnhancer Elements, GeneticEpithelial CellsGene Expression RegulationHaemophilus influenzaeHumansI-kappa B KinaseI-kappa B ProteinsMolecular Sequence DataNF-kappa BNF-KappaB Inhibitor alphaPhosphorylationbeta-DefensinsDEFB4A protein, humanI-kappa B KinaseI-kappa B ProteinsNF-kappa BNF-KappaB Inhibitor alphaNFKBIA protein, humanTranscription Factor RelADefensinInflammationInnate immunityMiddle earOtitis media

Identifiers

PMID24368180
PMCPMC3940165
OpenAlexW2065741576

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.