Evidence map›Paper›PMID 24367621›Full record

ArticlePloS one2013

Characterization of a pathogen induced thaumatin-like protein gene AdTLP from Arachis diogoi, a wild peanut.

Naveen Kumar Singh, Koppolu Raja Rajesh Kumar, Dilip Kumar, Pawan Shukla, P B Kirti

Abstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed.

  1. Article
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  7. Natural SNP Variation in GbOSM1 Promotor Enhances Verticillium Wilt Resistance in Cotton.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2024
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  8. Article
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  10. TheInternational journal of molecular sciences · 2024
    Article
  11. Review
  12. Transcriptome analysis ofFrontiers in microbiology · 2024
    Article
  13. Article
  14. Article
  15. Article
  16. The genusFrontiers in plant science · 2023
    Review
  17. Article
  18. Plants (Basel, Switzerland) · 2022
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Naveen Kumar SinghDepartment of Plant Sciences, University of Hyderabad, Hyderabad, India.
Koppolu Raja Rajesh KumarDepartment of Plant Sciences, University of Hyderabad, Hyderabad, India.
Dilip KumarDepartment of Plant Sciences, University of Hyderabad, Hyderabad, India.
Pawan ShuklaDepartment of Plant Sciences, University of Hyderabad, Hyderabad, India.
P B KirtiDepartment of Plant Sciences, University of Hyderabad, Hyderabad, India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Peanut (Arachis hypogaea L) is one of the widely cultivated and leading oilseed crops of the world and its yields are greatly affected by various biotic and abiotic stresses. Arachis diogoi, a wild relative of peanut, is an important source of genes for resistance against various stresses that affect peanut. In our previous study a thaumatin-like protein gene was found to be upregulated in a differential expression reverse transcription PCR (DDRT-PCR) study using the conidial spray of the late leaf spot pathogen, Phaeoisariopsis personata. In the present study, the corresponding full length cDNA was cloned using RACE-PCR and has been designated as AdTLP. It carried an open reading frame of 726 bp potentially capable of encoding a polypeptide of 241 amino acids with 16 conserved cysteine residues. The semi-quantitative RT-PCR analysis showed that the transcript level of AdTLP increased upon treatment with the late leaf spot pathogen of peanut, P. personata and various hormone treatments indicating its involvement in both, biotic and abiotic stresses. The antifungal activity of the purified recombinant protein was checked against different fungal pathogens, which showed enhanced anti-fungal activity compared to many other reported TLP proteins. The recombinant AdTLP-GFP fusion protein was found to be predominantly localized to extracellular spaces. Transgenic tobacco plants ectopically expressing AdTLP showed enhanced resistance to fungal pathogen, Rhizoctonia solani. The seedling assays showed enhanced tolerance of AdTLP transgenic plants against salt and oxidative stress. The transcript analysis of various defense related genes highlighted constitutively higher level expression of PR1a, PI-I and PI-II genes in transgenic plants. These results suggest that the AdTLP is a good candidate gene for enhancing stress resistance in crop plants.

Indexed as

Amino Acid SequenceAntifungal AgentsArachisAscomycotaBase SequenceCellulaseCloning, MolecularDNA, ComplementaryGene Expression Regulation, PlantGenome, PlantHydrogen PeroxideMolecular Sequence DataOxidative StressPlant ProteinsPlants, Genetically ModifiedPolymerase Chain ReactionAntifungal AgentsCellulaseDNA, ComplementaryHydrogen PeroxidePlant ProteinsRNA, MessengerSodium Chloridethaumatin protein, plant

Identifiers

PMID24367621
PMCPMC3868660

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.