Evidence map›Paper›PMID 24367270›Full record

ArticlePLoS genetics2013

Defining the role of ATP hydrolysis in mitotic segregation of bacterial plasmids.

Yoan Ah-Seng, Jérôme Rech, David Lane, Jean-Yves Bouet

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 57 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Plasmid partitioning driven by collective migration of ParA between nucleoid lobes.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  5. Review
  6. Article
  7. Genes · 2022
    Article
  8. Article
  9. 5'UTR sequences influence protein levels inFrontiers in microbiology · 2022
    Article
  10. Review
  11. Article
  12. CTP andeLife · 2021
    Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Review
  19. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Yoan Ah-SengLaboratoire de Microbiologie et Génétique Moléculaires, Centre National de Recherche Scientifique et l'Université Paul Sabatier, Toulouse, France.
Jérôme RechLaboratoire de Microbiologie et Génétique Moléculaires, Centre National de Recherche Scientifique et l'Université Paul Sabatier, Toulouse, France.
David LaneLaboratoire de Microbiologie et Génétique Moléculaires, Centre National de Recherche Scientifique et l'Université Paul Sabatier, Toulouse, France.
Jean-Yves BouetLaboratoire de Microbiologie et Génétique Moléculaires, Centre National de Recherche Scientifique et l'Université Paul Sabatier, Toulouse, France.
Laboratoire de Microbiologie et Génétique Moléculaires · FRUniversité Toulouse III - Paul Sabatier · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hydrolysis of ATP by partition ATPases, although considered a key step in the segregation mechanism that assures stable inheritance of plasmids, is intrinsically very weak. The cognate centromere-binding protein (CBP), together with DNA, stimulates the ATPase to hydrolyse ATP and to undertake the relocation that incites plasmid movement, apparently confirming the need for hydrolysis in partition. However, ATP-binding alone changes ATPase conformation and properties, making it difficult to rigorously distinguish the substrate and cofactor roles of ATP in vivo. We had shown that mutation of arginines R36 and R42 in the F plasmid CBP, SopB, reduces stimulation of SopA-catalyzed ATP hydrolysis without changing SopA-SopB affinity, suggesting the role of hydrolysis could be analyzed using SopA with normal conformational responses to ATP. Here, we report that strongly reducing SopB-mediated stimulation of ATP hydrolysis results in only slight destabilization of mini-F, although the instability, as well as an increase in mini-F clustering, is proportional to the ATPase deficit. Unexpectedly, the reduced stimulation also increased the frequency of SopA relocation over the nucleoid. The increase was due to drastic shortening of the period spent by SopA at nucleoid ends; average speed of migration per se was unchanged. Reduced ATP hydrolysis was also associated with pronounced deviations in positioning of mini-F, though time-averaged positions changed only modestly. Thus, by specifically targeting SopB-stimulated ATP hydrolysis our study reveals that even at levels of ATPase which reduce the efficiency of splitting clusters and the constancy of plasmid positioning, SopB still activates SopA mobility and plasmid positioning, and sustains near wild type levels of plasmid stability.

Indexed as

Adenosine TriphosphatasesAdenosine TriphosphateBacterial ProteinsBinding SitesCarrier ProteinsCentromereEscherichia coliEscherichia coli ProteinsF FactorHydrolysisMitosisMutationProtein BindingAdenosine TriphosphatasesAdenosine TriphosphateBacterial ProteinsCarrier ProteinsEscherichia coli ProteinsfliY protein, E coliSopA protein, BacteriaSopB protein, E coli

Identifiers

PMID24367270
PMCPMC3868542
OpenAlexW2069354799

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.