Evidence map›Paper›PMID 24367265›Full record

ArticlePLoS pathogens2013

Genome-wide RNAi screen identifies novel host proteins required for alphavirus entry.

Yaw Shin Ooi, Katie M Stiles, Catherine Y Liu, Gwen M Taylor, Margaret Kielian

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
9.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 80 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Review
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Small Molecule Inhibitors Targeting Chikungunya Virus.Current topics in microbiology and immunology · 2022
    Review
  15. Understanding Molecular Pathogenesis with Chikungunya Virus Research Tools.Current topics in microbiology and immunology · 2022
    Review
  16. Article
  17. Review
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Yaw Shin OoiDepartment of Cell Biology, Albert Einstein College of Medicine, Bronx, New York, New York, United States of America.
Katie M StilesDepartment of Cell Biology, Albert Einstein College of Medicine, Bronx, New York, New York, United States of America.
Catherine Y LiuDepartment of Cell Biology, Albert Einstein College of Medicine, Bronx, New York, New York, United States of America.
Gwen M TaylorDepartment of Cell Biology, Albert Einstein College of Medicine, Bronx, New York, New York, United States of America.
Margaret KielianDepartment of Cell Biology, Albert Einstein College of Medicine, Bronx, New York, New York, United States of America.
Albert Einstein College of Medicine · US

Funding

WORD PROCESSORP30CA013330 · NCI · YESHIVA UNIVERSITY · PI THOMAS E ROHAN · 1985 to 2026
$111.2M
MEDICAL SCIENTIST TRAINING PROGRAMT32GM007288 · NIGMS · YESHIVA UNIVERSITY · PI AKABAS, MYLES H. · 1985 to 2022
$35.6M
MOLECULAR MECHANISMS OF ALPHAVIRUS ENTRY AND EXITR01GM057454 · NIGMS · YESHIVA UNIVERSITY · PI KIELIAN, MARGARET · 1999 to 2020
$7.2M
MOLECULAR PATHOGENESIS OF INFECTIOUS DISEASEST32AI007506 · NIAID · YESHIVA UNIVERSITY · PI CASADEVALL, ARTURO · 1997 to 2012
$3.7M
MECHANISMS OF CARDIOVASCULAR DISEASEST32HL007675 · NHLBI · YESHIVA UNIVERSITY · PI SIBINGA, NICHOLAS E · 1989 to 2013
$2.2M
NCI NIH HHS P30 CA013330NCI NIH HHS P30-CA13330NHLBI NIH HHS T32 HL007675NHLBI NIH HHS T32HL007675NIAID NIH HHS T32 AI007506NIAID NIH HHS T32AI07506NIGMS NIH HHS R01 GM057454NIGMS NIH HHS T32 GM007288NIGMS NIH HHS T32 GM07288
6 · The paper itself

Abstract

The enveloped alphaviruses include important and emerging human pathogens such as Chikungunya virus and Eastern equine encephalitis virus. Alphaviruses enter cells by clathrin-mediated endocytosis, and exit by budding from the plasma membrane. While there has been considerable progress in defining the structure and function of the viral proteins, relatively little is known about the host factors involved in alphavirus infection. We used a genome-wide siRNA screen to identify host factors that promote or inhibit alphavirus infection in human cells. Fuzzy homologue (FUZ), a protein with reported roles in planar cell polarity and cilia biogenesis, was required for the clathrin-dependent internalization of both alphaviruses and the classical endocytic ligand transferrin. The tetraspanin membrane protein TSPAN9 was critical for the efficient fusion of low pH-triggered virus with the endosome membrane. FUZ and TSPAN9 were broadly required for infection by the alphaviruses Sindbis virus, Semliki Forest virus, and Chikungunya virus, but were not required by the structurally-related flavivirus Dengue virus. Our results highlight the unanticipated functions of FUZ and TSPAN9 in distinct steps of alphavirus entry and suggest novel host proteins that may serve as targets for antiviral therapy.

Indexed as

RNA InterferenceVirus InternalizationAlphavirusAlphavirus InfectionsAnimalsCells, CulturedChikungunya virusCricetinaeEndocytosisGenome, HumanHeLa CellsHost-Pathogen InteractionsHumansHuman Umbilical Vein Endothelial CellsRNA, Small InterferingSemliki forest virusRNA, Small Interfering

Identifiers

PMID24367265
PMCPMC3868536
OpenAlexW2043995584

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.