Evidence map›Paper›PMID 24367253›Full record

ArticlePLoS pathogens2013

Transcriptional analysis of murine macrophages infected with different Toxoplasma strains identifies novel regulation of host signaling pathways.

Mariane B Melo, Quynh P Nguyen, Cynthia Cordeiro, Musa A Hassan, Ninghan Yang, Renée McKell, Emily E Rosowski, Lindsay Julien, Vincent Butty, Marie-Laure Dardé and 4 more

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 64 papers.

0numbers the graph read from it
0cells of the map it votes in
64citing papers in PubMed
0.2field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

64 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Mutual regulations betweenFrontiers in immunology · 2024
    Review
  5. Article
  6. Review
  7. ThemSphere · 2023
    Article
  8. Article
  9. Review
  10. Article
  11. scDual-Seq ofFrontiers in immunology · 2023
    Article
  12. Effects of Ovine Monocyte-Derived Macrophage Infection by Recently IsolatedAnimals : an open access journal from MDPI · 2022
    Article
  13. Article
  14. Article
  15. Review
  16. Secreted Effectors Modulating Immune Responses toLife (Basel, Switzerland) · 2021
    Review
  17. Review
  18. Article
  19. Article
  20. Long Non-Coding RNA and mRNA Expression Analysis in Liver of Mice WithFrontiers in cellular and infection microbiology · 2021
    Article

4 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 3 countries.

Mariane B MeloMassachusetts Institute of Technology, Department of Biology, Cambridge, Massachusetts, United States of America.
Quynh P NguyenMassachusetts Institute of Technology, Department of Biology, Cambridge, Massachusetts, United States of America.
Cynthia CordeiroMassachusetts Institute of Technology, Department of Biology, Cambridge, Massachusetts, United States of America ; Internal Medicine Department, School of Medicine, Federal University of Minas Gerais, Belo Horizonte, Minas Gerais, Brazil ; Retina Service, Department of Ophthalmology, Massachusetts Eye and Ear Infirmary, Harvard Medical School, Boston, Massachusetts, United States of America.
Musa A HassanMassachusetts Institute of Technology, Department of Biology, Cambridge, Massachusetts, United States of America.
Ninghan YangMassachusetts Institute of Technology, Department of Biology, Cambridge, Massachusetts, United States of America.
Renée McKellMassachusetts Institute of Technology, Department of Biology, Cambridge, Massachusetts, United States of America.
Emily E RosowskiMassachusetts Institute of Technology, Department of Biology, Cambridge, Massachusetts, United States of America.
Lindsay JulienMassachusetts Institute of Technology, Department of Biology, Cambridge, Massachusetts, United States of America.
Vincent ButtyMassachusetts Institute of Technology, Department of Biology, Cambridge, Massachusetts, United States of America.
Marie-Laure DardéCentre National de Référence Toxoplasmose/Toxoplasma Biological Resource Center, Centre Hospitalier-Universitaire Dupuytren, Limoges, France ; Institut National de la Santé et de la Recherche Médicale, Unité Mixte de Recherche 1094, Neuroépidémiologie Tropicale, Laboratoire de Parasitologie-Mycologie, Faculté de Médecine, Université de Limoges, Limoges, France.
Daniel AjzenbergCentre National de Référence Toxoplasmose/Toxoplasma Biological Resource Center, Centre Hospitalier-Universitaire Dupuytren, Limoges, France ; Institut National de la Santé et de la Recherche Médicale, Unité Mixte de Recherche 1094, Neuroépidémiologie Tropicale, Laboratoire de Parasitologie-Mycologie, Faculté de Médecine, Université de Limoges, Limoges, France.
Katherine FitzgeraldUniversity of Massachusetts Medical School, Division of Infectious Diseases and Immunology, Worcester, Massachusetts, United States of America.
Lucy H YoungRetina Service, Department of Ophthalmology, Massachusetts Eye and Ear Infirmary, Harvard Medical School, Boston, Massachusetts, United States of America.
Jeroen P J SaeijMassachusetts Institute of Technology, Department of Biology, Cambridge, Massachusetts, United States of America.
Massachusetts Institute of Technology · USMassachusetts Eye and Ear Infirmary · USInserm · FRInstitut d’Epidémiologie Neurologique et de Neurologie Tropicale · FRUniversity of Massachusetts Chan Medical School · US

Funding

PRE-DOCTORAL TRAINING IN THE BIOLOGICAL SCIENCEST32GM007287 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI BELL, STEPHEN P., KEATING, AMY E · 1985 to 2019
$40.8M
Toxoplasma strain-specific modulation of mouse immune cellsR01AI080621 · NIAID · UNIVERSITY OF CALIFORNIA AT DAVIS · PI SAEIJ, JEROEN · 2009 to 2018
$3.6M
NIAID NIH HHS R01 AI080621NIAID NIH HHS R01-AI080621NIGMS NIH HHS 5-T32- GM007287-33NIGMS NIH HHS T32 GM007287PHS HHS AIO57159Wellcome Trust
6 · The paper itself

Abstract

Most isolates of Toxoplasma from Europe and North America fall into one of three genetically distinct clonal lineages, the type I, II and III lineages. However, in South America these strains are rarely isolated and instead a great variety of other strains are found. T. gondii strains differ widely in a number of phenotypes in mice, such as virulence, persistence, oral infectivity, migratory capacity, induction of cytokine expression and modulation of host gene expression. The outcome of toxoplasmosis in patients is also variable and we hypothesize that, besides host and environmental factors, the genotype of the parasite strain plays a major role. The molecular basis for these differences in pathogenesis, especially in strains other than the clonal lineages, remains largely unexplored. Macrophages play an essential role in the early immune response against T. gondii and are also the cell type preferentially infected in vivo. To determine if non-canonical Toxoplasma strains have unique interactions with the host cell, we infected murine macrophages with 29 different Toxoplasma strains, representing global diversity, and used RNA-sequencing to determine host and parasite transcriptomes. We identified large differences between strains in the expression level of known parasite effectors and large chromosomal structural variation in some strains. We also identified novel strain-specifically regulated host pathways, including the regulation of the type I interferon response by some atypical strains. IFNβ production by infected cells was associated with parasite killing, independent of interferon gamma activation, and dependent on endosomal Toll-like receptors in macrophages and the cytoplasmic receptor retinoic acid-inducible gene 1 (RIG-I) in fibroblasts.

Indexed as

AnimalsCells, CulturedFemaleGene Expression ProfilingGene Expression RegulationHEK293 CellsHost-Parasite InteractionsHumansMacrophagesMiceMice, Inbred C57BLMultigene FamilySignal TransductionToxoplasma

Identifiers

PMID24367253
PMCPMC3868521
OpenAlexW1550695077

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.