Evidence map›Paper›PMID 24365748›Full record

ArticleLaboratory investigation; a journal of technical methods and pathology2014

Human colonic crypts in culture: segregation of immunochemical markers in normal versus adenoma-derived.

Michael K Dame, Yan Jiang, Henry D Appelman, Kelly D Copley, Shannon D McClintock, Muhammad Nadeem Aslam, Durga Attili, B Joseph Elmunzer, Dean E Brenner, James Varani and 1 more

Registry-linked trialOpen access · bronzeAbstract read
In one paragraph

Article in Laboratory investigation; a journal of technical methods and pathology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT02647671 (The Effects of Calcium in Conjunction With Multi-mineral Supplementation), which is not on this map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT02647671 phase1completednot on this mapstarted 2016, after this paper: background citation

The Effects of Calcium in Conjunction With Multi-mineral Supplementation (Aquamin) on Gut Microbes and Microbially-derived Metabolites in Subjects at Risk for Colon Cancer in a Randomized Controlled Trial

TypeinterventionalSponsorJames VaraniRan2016 to 2021Enrolled36ConditionsColonic CancerArmsAquamin®, Calcium Carbonate, Placebo
3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 52 citations in OpenAlex.

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  8. Testing Epithelial Permeability in Fetal Tissue-Derived Enteroids.Journal of visualized experiments : JoVE · 2022
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  10. Membrane Bound Peroxiredoxin-1 Serves as a Biomarker forAntioxidants & redox signaling · 2022
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  19. A modified cholera toxin B subunit containing an ER retention motif enhances colon epithelial repairFASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2019
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Michael K DameDepartment of Pathology, University of Michigan, Ann Arbor, MI, USA.
Yan JiangDepartment of Internal Medicine, Comprehensive Cancer Center, University of Michigan, Ann Arbor, MI, USA.
Henry D AppelmanDepartment of Pathology, University of Michigan, Ann Arbor, MI, USA.
Kelly D CopleyDepartment of Pathology, University of Michigan, Ann Arbor, MI, USA.
Shannon D McClintockDepartment of Pathology, University of Michigan, Ann Arbor, MI, USA.
Muhammad Nadeem AslamDepartment of Pathology, University of Michigan, Ann Arbor, MI, USA.
Durga AttiliDepartment of Pathology, University of Michigan, Ann Arbor, MI, USA.
B Joseph ElmunzerDivision of Gastroenterology, Department of Internal Medicine, University of Michigan, Ann Arbor, MI, USA.
Dean E Brenner1] Department of Internal Medicine, Comprehensive Cancer Center, University of Michigan, Ann Arbor, MI, USA [2] Medical Service and Geriatrics Research Education and Clinical Center, VA Medical Center, Ann Arbor, MI, USA.
James VaraniDepartment of Pathology, University of Michigan, Ann Arbor, MI, USA.
D Kim TurgeonDivision of Gastroenterology, Department of Internal Medicine, University of Michigan, Ann Arbor, MI, USA.
University of Michigan–Ann Arbor · US

Funding

XenograftP30CA046592 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI THEODORE S LAWRENCE · 1988 to 2026
$178.2M
Translational Research in GI CancerP50CA130810 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI BRENNER, DEAN E. · 2010 to 2016
$11.8M
Catalysis by Prostaglandin Endoperoxide H SynthasesR01GM068848 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI SMITH, WILLIAM L · 2003 to 2014
$5.6M
Dietary Marine Algae Extract and Colon Cancer ChemopreventionR21CA140760 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI VARANI, JAMES · 2009 to 2010
$374k
NCI NIH HHS P30 CA046592NCI NIH HHS P30 CA46592NCI NIH HHS P50 CA130810NCI NIH HHS R21 CA140760NCI NIH HHS R21 CA140760-02NIGMS NIH HHS 5R01 GM068848NIGMS NIH HHS R01 GM068848
6 · The paper itself

Abstract

In order to advance a culture model of human colonic neoplasia, we developed methods for the isolation and in vitro maintenance of intact colonic crypts from normal human colon tissue and adenomas. Crypts were maintained in three-dimensional Matrigel culture with a simple, serum-free, low Ca(2+) (0.15 mM) medium. Intact colonic crypts from normal human mucosa were viably maintained for 3-5 days with preservation of the in situ crypt-like architecture, presenting a distinct base and apex. Abnormal structures from adenoma tissue could be maintained through multiple passages (up to months), with expanding buds/tubules. Immunohistochemical markers for intestinal stem cells (Lgr5), growth (Ki67), differentiation (E-cadherin, cytokeratin 20 (CK20) and mucin 2 (MUC2)) and epithelial turnover (Bax, cleaved Caspase-3), paralleled the changes in function. The epithelial cells in normal crypts followed the physiological sequence of progression from proliferation to differentiation to dissolution in a spatially and temporally appropriate manner. Lgr5 expression was seen in a few basal cells of freshly isolated crypts, but was not detected after 1-3 days in culture. After 24 h in culture, crypts from normal colonic tissue continued to show strong Ki67 and MUC2 expression at the crypt base, with a gradual decrease over time such that by days 3-4 Ki67 was not expressed. The differentiation marker CK20 increased over the same period, eventually becoming intense throughout the whole crypt. In adenoma-derived structures, expression of markers for all stages of progression persisted for the entire time in culture. Lgr5 showed expression in a few select cells after months in culture. Ki67 and MUC2 were largely associated with the proliferative budding regions while CK20 was localized to the parent structure. This ex vivo culture model of normal and adenomatous crypts provides a readily accessible tool to help understand the growth and differentiation process in human colonic epithelium.

Indexed as

Models, BiologicalAdenomaBiomarkersCadherinsCalciumCollagenColonColonic NeoplasmsDrug CombinationsFluorescent Antibody TechniqueHumansImmunohistochemistryIntestinal MucosaKeratin-20Ki-67 AntigenLamininBiomarkersCadherinsCalciumCollagenDrug CombinationsKeratin-20Ki-67 AntigenLamininLGR5 protein, humanmatrigelMUC2 protein, humanMucin-2ProteoglycansReceptors, G-Protein-Coupled

Identifiers

PMID24365748
PMCPMC4108175
OpenAlexW2048446469

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.