Evidence map›Paper›PMID 24365332›Full record

ArticleBMC genomics2013

Comparative analysis of genome sequences from four strains of the Buchnera aphidicola Mp endosymbion of the green peach aphid, Myzus persicae.

Zhijie Jiang, Derek H Jones, Sawsan Khuri, Nicholas F Tsinoremas, Tania Wyss, Georg Jander, Alex C C Wilson

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
4.4field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 46 citations in OpenAlex.

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  12. Trading amino acids at the aphid-Proceedings of the National Academy of Sciences of the United States of America · 2019
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  13. mTOR Complex 1 Implicated in Aphid/G3 (Bethesda, Md.) · 2018
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  17. Conserved rates and patterns of transcription errors across bacterial growth states and lifestyles.Proceedings of the National Academy of Sciences of the United States of America · 2016
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  18. Heritable symbiosis: The advantages and perils of an evolutionary rabbit hole.Proceedings of the National Academy of Sciences of the United States of America · 2015
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  20. Interchangeable allies: exploiting development and selection to swap symbionts.Proceedings of the National Academy of Sciences of the United States of America · 2015
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Zhijie Jiang
Derek H Jones
Sawsan Khuri
Nicholas F Tsinoremas
Tania Wyss
Georg Jander
Alex C C WilsonDepartment of Biology, University of Miami, Coral Gables 33146, FL, USA. acwilson@bio.miami.edu.
University of Miami · USIthaca College · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundMyzus persicae, the green peach aphid, is a polyphagous herbivore that feeds from hundreds of species of mostly dicot crop plants. Like other phloem-feeding aphids, M. persicae rely on the endosymbiotic bacterium, Buchnera aphidicola (Buchnera Mp), for biosynthesis of essential amino acids and other nutrients that are not sufficiently abundant in their phloem sap diet. Tobacco-specialized M. persicae are typically red and somewhat distinct from other lineages of this species. To determine whether the endosymbiotic bacteria of M. persicae could play a role in tobacco adaptation, we sequenced the Buchnera Mp genomes from two tobacco-adapted and two non-tobacco M. persicae lineages.

resultsWith a genome size of 643.5 kb and 579 predicted genes, Buchnera Mp is the largest Buchnera genome sequenced to date. No differences in gene content were found between the four sequenced Buchnera Mp strains. Compared to Buchnera APS from the well-studied pea aphid, Acyrthosiphon pisum, Buchnera Mp has 21 additional genes. These include genes encoding five enzymes required for biosynthesis of the modified nucleoside queosine, the heme pathway enzyme uroporphyrinogen III synthase, and asparaginase. Asparaginase, which is also encoded by the genome of the aphid host, may allow Buchnera Mp to synthesize essential amino acids from asparagine, a relatively abundant phloem amino acid.

conclusionsTogether our results indicate that the obligate intracellular symbiont Buchnera aphidicola does not contribute to the adaptation of Myzus persicae to feeding on tobacco.

Indexed as

Genome, BacterialSymbiosisAdaptation, BiologicalAnimalsAphidsBuchneraChromosome MappingDNA, BacterialMicrosatellite RepeatsNicotianaPlasmidsSequence Analysis, DNADNA, Bacterial

Identifiers

PMID24365332
PMCPMC3890641
OpenAlexW1977496602

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.