Evidence map›Paper›PMID 24363315›Full record

ArticleThe Plant cell2013

NAC transcription factor speedy hyponastic growth regulates flooding-induced leaf movement in Arabidopsis.

Mamoona Rauf, Muhammad Arif, Joachim Fisahn, Gang-Ping Xue, Salma Balazadeh, Bernd Mueller-Roeber

RetractedOpen access · greenAbstract readRetracted Publication
In one paragraph

Article in The Plant cell, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It has been retracted, and should not be counted. Cited by 87 papers.

0numbers the graph read from it
0cells of the map it votes in
87citing papers in PubMed
10.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

87 citing papers in PubMed, 152 citations in OpenAlex.

  1. Article
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  4. Review
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  9. Depletion of Gibberellin Signaling Up-RegulatesInternational journal of molecular sciences · 2024
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  15. Article
  16. A spatially resolved multiomic single-cell atlas of soybean development.bioRxiv : the preprint server for biology · 2024
    Article
  17. Article
  18. Structure and growth of plant cell walls.Nature reviews. Molecular cell biology · 2024
    Review
  19. Mechanism of the Pulvinus-Driven Leaf Movement: An Overview.International journal of molecular sciences · 2024
    Review
  20. Review

27 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Mamoona RaufUniversity of Potsdam, Institute of Biochemistry and Biology, 14476 Potsdam, Germany.
Muhammad Arif
Joachim Fisahn
Gang-Ping Xue
Salma Balazadeh
Bernd Mueller-Roeber
University of Potsdam · DEMax Planck Institute of Molecular Plant Physiology · DEPlant Industry · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In rosette plants, root flooding (waterlogging) triggers rapid upward (hyponastic) leaf movement representing an important architectural stress response that critically determines plant performance in natural habitats. The directional growth is based on localized longitudinal cell expansion at the lower (abaxial) side of the leaf petiole and involves the volatile phytohormone ethylene (ET). We report the existence of a transcriptional core unit underlying directional petiole growth in Arabidopsis thaliana, governed by the NAC transcription factor speedy hyponastic growth (SHYG). Overexpression of SHYG in transgenic Arabidopsis thaliana enhances waterlogging-triggered hyponastic leaf movement and cell expansion in abaxial cells of the basal petiole region, while both responses are largely diminished in shyg knockout mutants. Expression of several expansin and xyloglucan endotransglycosylase/hydrolase genes encoding cell wall-loosening proteins was enhanced in SHYG overexpressors but lowered in shyg. We identified ACC oxidase5 (ACO5), encoding a key enzyme of ET biosynthesis, as a direct transcriptional output gene of SHYG and found a significantly reduced leaf movement in response to root flooding in aco5 T-DNA insertion mutants. Expression of SHYG in shoot tissue is triggered by root flooding and treatment with ET, constituting an intrinsic ET-SHYG-ACO5 activator loop for rapid petiole cell expansion upon waterlogging.

Indexed as

Stress, PhysiologicalAmino Acid OxidoreductasesArabidopsisArabidopsis ProteinsBinding SitesCell EnlargementGene Expression Regulation, PlantMutagenesis, InsertionalPlant LeavesPlant RootsPlants, Genetically ModifiedPlant ShootsPromoter Regions, GeneticTranscription FactorsWater1-aminocyclopropane-1-carboxylic acid oxidaseAmino Acid OxidoreductasesArabidopsis ProteinsSHYG protein, ArabidopsisTranscription FactorsWater

Identifiers

PMID24363315
PMCPMC3903997
OpenAlexW2164444403

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.