Evidence map›Paper›PMID 24362576›Full record

ArticleInternational journal of molecular sciences2013

Efficacy and feasibility of the epithelial cell adhesion molecule (EpCAM) immunomagnetic cell sorter for studies of DNA methylation in colorectal cancer.

Alessandra Failli, Annalisa Legitimo, Francesca Migheli, Fabio Coppedè, John C Mathers, Roberto Spisni, Paolo Miccoli, Lucia Migliore, Rita Consolini

Open access · goldAbstract readEvaluation Study
In one paragraph

Article in International journal of molecular sciences, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.4field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Investigation ofFrontiers in molecular neuroscience · 2020
    Article
  2. Article
  3. Dendritic cell defects in the colorectal cancer.Human vaccines & immunotherapeutics · 2014
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Alessandra Failli
Annalisa Legitimo
Francesca Migheli
Fabio Coppedè
John C Mathers
Roberto Spisni
Paolo Miccoli
Lucia Migliore
Rita ConsoliniDepartment of Clinical and Experimental Medicine, University of Pisa, Pisa 56126, Italy. rita.consolini@med.unipi.it.
University of Pisa · ITNewcastle Hospitals - Campus for Ageing and Vitality · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The aim of this work was to assess the impact on measurements of methylation of a panel of four cancer gene promoters of purifying tumor cells from colorectal tissue samples using the epithelial cell adhesion molecule (EpCAM)-immunomagnetic cell enrichment approach. We observed that, on average, methylation levels were higher in enriched cell fractions than in the whole tissue, but the difference was significant only for one out of four studied genes. In addition, there were strong correlations between methylation values for individual samples of whole tissue and the corresponding enriched cell fractions. Therefore, assays on whole tissue are likely to provide reliable estimates of tumor-specific methylation of cancer genes. However, tumor cell tissue separation using immunomagnetic beads could, in some cases, give a more accurate value of gene promoter methylation than the analysis of the whole cancer tissue, although relatively expensive and time-consuming. The efficacy and feasibility of the immunomagnetic cell sorting for methylation studies are discussed.

Indexed as

DNA MethylationAgedAged, 80 and overAntigens, NeoplasmBiomarkers, TumorCell Adhesion MoleculesColorectal NeoplasmsCpG IslandsEpithelial Cell Adhesion MoleculeFemaleFlow CytometryHumansImmunomagnetic SeparationMaleMiddle AgedNeoplasm StagingAntigens, NeoplasmBiomarkers, TumorCell Adhesion MoleculesEpithelial Cell Adhesion Molecule

Identifiers

PMID24362576
PMCPMC3907797
OpenAlexW2063217517

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.