Evidence map›Paper›PMID 24360784›Full record

ArticleDevelopmental cell2014

Structural insights into assembly and regulation of the plasma membrane phosphatidylinositol 4-kinase complex.

Xudong Wu, Richard J Chi, Jeremy M Baskin, Louise Lucast, Christopher G Burd, Pietro De Camilli, Karin M Reinisch

Abstract read
In one paragraph

Article in Developmental cell, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Molecular basis for plasma membrane recruitment of PI4KA by EFR3.bioRxiv : the preprint server for biology · 2024
    Article
  9. Efr3b is essential for social recognition by modulating the excitability of CA2 pyramidal neurons.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  10. EFR3A: a new raft domain organizing protein?Cellular & molecular biology letters · 2023
    Article
  11. Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. A synonymous mutation inFrontiers in immunology · 2022
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Xudong WuDepartment of Cell Biology, Yale School of Medicine, New Haven, CT 06520, USA.
Richard J ChiDepartment of Cell Biology, Yale School of Medicine, New Haven, CT 06520, USA.
Jeremy M BaskinDepartment of Cell Biology, Yale School of Medicine, New Haven, CT 06520, USA; Program in Cellular Neuroscience, Neurodegeneration, and Repair and Howard Hughes Medical Institute, Yale School of Medicine, New Haven, CT 06510, USA.
Louise LucastDepartment of Cell Biology, Yale School of Medicine, New Haven, CT 06520, USA; Program in Cellular Neuroscience, Neurodegeneration, and Repair and Howard Hughes Medical Institute, Yale School of Medicine, New Haven, CT 06510, USA.
Christopher G BurdDepartment of Cell Biology, Yale School of Medicine, New Haven, CT 06520, USA.
Pietro De CamilliDepartment of Cell Biology, Yale School of Medicine, New Haven, CT 06520, USA; Program in Cellular Neuroscience, Neurodegeneration, and Repair and Howard Hughes Medical Institute, Yale School of Medicine, New Haven, CT 06510, USA.
Karin M ReinischDepartment of Cell Biology, Yale School of Medicine, New Haven, CT 06520, USA. Electronic address: karin.reinisch@yale.edu.

Funding

Yale/NIDA Neuroproteomics Research CenterP30DA018343 · NIDA · YALE UNIVERSITY · PI Marina R Picciotto · 2004 to 2026
$37.1M
Life Science and Biomedical technology Research center at NSLS-II LSBRP41GM111244 · NIGMS · BROOKHAVEN SCIENCE ASSOC-BROOKHAVEN LAB · PI MCSWEENEY, SEAN · 2014 to 2018
$16.4M
Regulatory Mechanisms in Membrane TraffickingR01GM080616 · NIGMS · YALE UNIVERSITY · PI REINISCH, KARIN M · 2007 to 2018
$4.1M
PtdIns 4-Kinase Regulation of Protein Sorting in the Golgi ApparatusR01GM095766 · NIGMS · YALE UNIVERSITY · PI BURD, CHRISTOPHER G · 2011 to 2021
$2.9M
Molecular Mechanisms in Synaptic Vesicle RecyclingR37NS036251 · NINDS · YALE UNIVERSITY · PI DE CAMILLI, PIETRO · 2010 to 2016
$2.7M
NIDA NIH HHS P30 DA018343NIGMS NIH HHS P41 GM111244NIGMS NIH HHS R01 GM080616NIGMS NIH HHS R01 GM095766NINDS NIH HHS R37 NS036251
6 · The paper itself

Abstract

Plasma membrane PI4P helps determine the identity of this membrane and plays a key role in signal transduction as the precursor of PI(4,5)P2 and its metabolites. Here, we report the atomic structure of the protein scaffold that is required for the plasma membrane localization and function of Stt4/PI4KIIIα, the PI 4-kinase responsible for this PI4P pool. Both proteins of the scaffold, Efr3 and YPP1/TTC7, are composed of α-helical repeats, which are arranged into a rod in Efr3 and a superhelix in Ypp1. A conserved basic patch in Efr3, which binds acidic phospholipids, anchors the complex to the plasma membrane. Stt4/PI4KIIIα is recruited by interacting with the Ypp1 C-terminal lobe, which also binds to unstructured regions in the Efr3 C terminus. Phosphorylation of this Efr3 region counteracts Ypp1 binding, thus providing a mechanism through which Stt4/PI4KIIIα recruitment, and thus a metabolic reaction of fundamental importance in cell physiology, can be regulated.

Indexed as

1-Phosphatidylinositol 4-KinaseAdaptor Proteins, Vesicular TransportAmino Acid SequenceBinding SitesCell MembraneMolecular Sequence DataMutationPhospholipidsPhosphorylationProtein BindingProtein Structure, TertiaryProtein TransportSaccharomyces cerevisiaeSaccharomyces cerevisiae Proteins1-Phosphatidylinositol 4-KinaseAdaptor Proteins, Vesicular TransportEFR3 protein, S cerevisiaePhospholipidsSaccharomyces cerevisiae ProteinsSTT4 protein, S cerevisiaeYPP1 protein, S cerevisiae

Identifiers

PMID24360784
PMCPMC4349574

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.