Evidence map›Paper›PMID 24360120›Full record

ArticleThe Journal of surgical research2014

Utility and limits of Hprt-Cre technology in generating mutant mouse embryos.

Krzysztof M Zaremba, Amy L Reeder, Anna Kowalkowski, Eden Girma, Peter F Nichol

Abstract read
In one paragraph

Article in The Journal of surgical research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.2field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 2 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Krzysztof M ZarembaDivision of Pediatric Surgery, Department of Surgery, University of Wisconsin SMPH Madison, Madison, Wisconsin.
Amy L ReederDivision of Pediatric Surgery, Department of Surgery, University of Wisconsin SMPH Madison, Madison, Wisconsin.
Anna KowalkowskiDivision of Pediatric Surgery, Department of Surgery, University of Wisconsin SMPH Madison, Madison, Wisconsin.
Eden GirmaDivision of Pediatric Surgery, Department of Surgery, University of Wisconsin SMPH Madison, Madison, Wisconsin.
Peter F NicholDivision of Pediatric Surgery, Department of Surgery, University of Wisconsin SMPH Madison, Madison, Wisconsin. Electronic address: nichol@surgery.wisc.edu.
University of Wisconsin–Madison · US

Funding

Role of Fgfr2IIIb in epithelial mesenchymal signaling in intestinal developmentK08DK087854 · NIDDK · UNIVERSITY OF WISCONSIN-MADISON · PI NICHOL, PETER F · 2010 to 2014
$808k
Characterization of intestinal regeneration in a model of intestinal atresiaR03DK098481 · NIDDK · UNIVERSITY OF WISCONSIN-MADISON · PI NICHOL, PETER F · 2013 to 2014
$151k
NIDDK NIH HHS 1K08DK087854-03NIDDK NIH HHS K08 DK087854NIDDK NIH HHS R03 DK098481
6 · The paper itself

Abstract

backgroundHprt-Cre doubles the prevalence of homozygous null embryos per litter versus heterozygous breedings without decreasing litter size. Resulting mutant embryos are genotypically and phenotypically equivalent between strategies. We set out to confirm the effectiveness of this approach with other alleles and hypothesized that it would increase efficiency in generating compound mutants. MATERIALS AND

methodsNull mutants for Cyp26b1, Pitx2, and Shh were generated with Hprt-Cre from conditional alleles as were double and triple allelic combinations of Fgfr2IIIb, Raldh2, and Cyp26b1. Embryos were genotyped and phenotyped by whole mount photography, histology, and immunohistochemistry.

resultsFifty percent of Hprt-Cre litters were homozygous null for Cyp26b1 (15/29) and Pitx2 (75/143), with phenotypic and genotypic equivalence to mutants from standard heterozygous breedings. In multi-allele breedings, mutant embryos constituted half of litters without significant embryo loss. In contrast, Shh breedings yielded a smaller ratio of embryos carrying two recombined alleles (6 of 16), with a significant litter size reduction because of early embryonic lethality (16 live embryos from 38 deciduae).

conclusionsHprt-Cre can be used to efficiently generate large numbers of mutant embryos with a number of alleles. Compound mutant generation was equally efficient. However, efficiency is reduced for genes whose protein product potentially interacts with the Hprt pathway (e.g., Shh).

Indexed as

Gene Expression Regulation, DevelopmentalAldehyde OxidoreductasesAnimalsBreedingCytochrome P-450 Enzyme SystemDeciduaEmbryo, MammalianFemaleGenetic EngineeringHedgehog ProteinsHeterozygoteHomeobox Protein PITX2Homeodomain ProteinsHomozygoteLitter SizeMaleAldehyde OxidoreductasesCyp26b1 protein, mouseCytochrome P-450 Enzyme SystemFgfr2 protein, mouseHedgehog ProteinsHomeobox Protein PITX2Homeodomain ProteinsRALDH2 protein, mouseReceptor, Fibroblast Growth Factor, Type 2Retinoic Acid 4-HydroxylaseShh protein, mouseTranscription FactorsCompound mutantsCyp26b1EfficiencyFgfr2IIIbHomozygous null mutantsHprt-CreMousePitx2Raldh2Shh

Identifiers

PMID24360120
PMCPMC3959277
OpenAlexW2015362523

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.