Evidence map›Paper›PMID 24358888›Full record

ArticleF1000Research2013

A p53-like transcription factor similar to Ndt80 controls the response to nutrient stress in the filamentous fungus, Aspergillus nidulans.

Margaret E Katz, Kathryn Braunberger, Gauncai Yi, Sarah Cooper, Heather M Nonhebel, Cedric Gondro

Open access · goldAbstract read
In one paragraph

Article in F1000Research, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 39 citations in OpenAlex.

  1. Article
  2. Article
  3. Development ofJournal of fungi (Basel, Switzerland) · 2024
    Article
  4. Regulation of nutrient utilization in filamentous fungi.Applied microbiology and biotechnology · 2023
    Review
  5. Transcription FactorJournal of fungi (Basel, Switzerland) · 2022
    Article
  6. Article
  7. The Transcription FactorFrontiers in microbiology · 2022
    Article
  8. Article
  9. Understanding the Role ofJournal of fungi (Basel, Switzerland) · 2021
    Article
  10. Induction and Repression of Hydrolase Genes inFrontiers in microbiology · 2021
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Genetic Analysis ofmSphere · 2018
    Article
  16. Article
  17. Article
  18. Phenotypic and Proteomic Analysis of theFrontiers in microbiology · 2017
    Article
  19. Genome sequencing and transcriptome analysis ofBiotechnology for biofuels · 2017
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Margaret E KatzDepartment of Molecular and Cellular Biology, University of New England, Armidale, NSW 2351, Australia.
Kathryn BraunbergerDepartment of Molecular and Cellular Biology, University of New England, Armidale, NSW 2351, Australia.
Gauncai YiDepartment of Molecular and Cellular Biology, University of New England, Armidale, NSW 2351, Australia ; Current address: Nanjing Hospital for Women & Children's Health, Nanjing Medical University, Nanjing City, 210004, China.
Sarah CooperDepartment of Molecular and Cellular Biology, University of New England, Armidale, NSW 2351, Australia.
Heather M NonhebelDepartment of Molecular and Cellular Biology, University of New England, Armidale, NSW 2351, Australia.
Cedric GondroThe Centre for Genetic Analysis and Applications, University of New England, Armidale, NSW 2351, Australia.
University of New England · AUNanjing Children's Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Aspergillus nidulans xprG gene encodes a putative transcriptional activator that is a member of the Ndt80 family in the p53-like superfamily of proteins. Previous studies have shown that XprG controls the production of extracellular proteases in response to starvation. We undertook transcriptional profiling to investigate whether XprG has a wider role as a global regulator of the carbon nutrient stress response. Our microarray data showed that the expression of a large number of genes, including genes involved in secondary metabolism, development, high-affinity glucose uptake and autolysis, were altered in an xprG Δ null mutant. Many of these genes are known to be regulated in response to carbon starvation. We confirmed that sterigmatocystin and penicillin production is reduced in xprG (-) mutants. The loss of fungal mass and secretion of pigments that accompanies fungal autolysis in response to nutrient depletion was accelerated in an xprG1 gain-of-function mutant and decreased or absent in an xprG (-) mutant. The results support the hypothesis that XprG plays a major role in the response to carbon limitation and that nutrient sensing may represent one of the ancestral roles for the p53-like superfamily. Disruption of the AN6015 gene, which encodes a second Ndt80-like protein, showed that it is required for sexual reproduction in A. nidulans.

Identifiers

PMID24358888
PMCPMC3821154
OpenAlexW1987765535

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.