Evidence map›Paper›PMID 24352855›Full record

ArticleOrigins of life and evolution of the biosphere : the journal of the International Society for the Study of the Origin of Life2013

Selective stabilization of ribose by borate.

Yoshihiro Furukawa, Mana Horiuchi, Takeshi Kakegawa

Abstract read
PubMed Publisher
In one paragraph

Article in Origins of life and evolution of the biosphere : the journal of the International Society for the Study of the Origin of Life, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 74 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Boron-assisted abiotic polypeptide synthesis.Communications chemistry · 2023
    Article
  8. Article
  9. Prebiotic Pathway from Ribose to RNA Formation.International journal of molecular sciences · 2021
    Review
  10. Synthesis ofScience advances · 2021
    Article
  11. Article
  12. Proto-Urea-RNA (Wöhler RNA) Containing Unusually Stable Urea Nucleosides.Angewandte Chemie (International ed. in English) · 2019
    Review
  13. Article
  14. Article
  15. Review
  16. Origin of the RNA world: The fate of nucleobases in warm little ponds.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  17. Review
  18. Occurrence of Tourmaline in Metasedimentary Rocks of the Isua Supracrustal Belt, Greenland: Implications for Ribose Stabilization in Hadean Marine Sediments.Origins of life and evolution of the biosphere : the journal of the International Society for the Study of the Origin of Life · 2016
    Article
  19. Effects of Silicate, Phosphate, and Calcium on the Stability of Aldopentoses.Origins of life and evolution of the biosphere : the journal of the International Society for the Study of the Origin of Life · 2016
    Article
  20. Nothing Boring About Boron.Integrative medicine (Encinitas, Calif.) · 2015
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Yoshihiro FurukawaDepartment of Earth Science, Tohoku University, Aza-aoba 6-3, Aramaki, Aoba-ku, Sendai, Japan, furukawa@m.tohoku.ac.jp.
Mana Horiuchi
Takeshi Kakegawa
Tohoku University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this study, borate was found to selectively increase the stability of ribose over other aldopentoses. Ribose is the only sugar present in both early RNA-based biochemistry and contemporary DNA-based life, and the stability of ribose is of fundamental concern for determining the origin of early RNA-based biochemistry. The formose reaction is a potential process in the prebiotic synthesis of ribose and its stereoisomers arabinose, xylose, and lyxose. Ribose is the least stable of these aldopentoses, raising the fundamental question of whether it was originally a component of primitive RNA or was selected through biotic processes. Borate is known to increase the stability of aldopentoses, but the specific differences in the stabilization achieved among different stereoisomers remain unclear. In this study, it was found that the stabilities of all of the tested pentoses increased with the concentration of added borate, but notably, the stability of ribose increased the most. The predominant formation of complexes between borate and ribose was verified, in agreement with previous studies. This borate complex formation might have sequestered ribose from the isomerization and decomposition reactions, resulting in its selective stabilization. These findings indicate that ribose could have accumulated in borate-rich environments on the early Earth and suggest that ribose-based nucleotides combined with phosphate and nucleobases formed abiotically.

Indexed as

Evolution, ChemicalBoratesChromatography, LiquidHydrogen-Ion ConcentrationMass SpectrometryPentosesRiboseBoratesPentosesRibose

Identifiers

PMID24352855
OpenAlexW2029545821

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.