Evidence map›Paper›PMID 24352166›Full record

ArticleGenes and immunity2014

Worldwide genetic variation at the 3' untranslated region of the HLA-G gene: balancing selection influencing genetic diversity.

A Sabbagh, P Luisi, E C Castelli, L Gineau, D Courtin, J Milet, J D Massaro, H Laayouni, P Moreau, E A Donadi and 1 more

Abstract read
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In one paragraph

Article in Genes and immunity, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 77 citations in OpenAlex.

  1. Article
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  4. Association ofPharmaceutics · 2022
    Article
  5. Article
  6. Review
  7. Role of HLA-G in Viral Infections.Frontiers in immunology · 2022
    Review
  8. Frontiers in immunology · 2022
    Article
  9. Article
  10. Review
  11. Review
  12. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 7 institutions in 4 countries.

A Sabbagh1] Institut de Recherche pour le Développement, UMR 216 Mère et enfant face aux infections tropicales, Paris, France [2] Faculté de Pharmacie, Université Paris Descartes, Sorbonne Paris Cité, Paris, France.
P LuisiInstitute of Evolutionary Biology, CEXS-UPF-PRBB, Catalonia, Barcelona, Spain.
E C CastelliDepartment of Pathology, School of Medicine of Botucatu, University of the State of São Paulo-UNESP, Botucatu-SP, Brazil.
L Gineau1] Institut de Recherche pour le Développement, UMR 216 Mère et enfant face aux infections tropicales, Paris, France [2] Faculté de Pharmacie, Université Paris Descartes, Sorbonne Paris Cité, Paris, France.
D CourtinIRD, UMR 216, Centre d'Etude et de Recherche sur le Paludisme Associé à la Grossesse et à l'Enfance (CERPAGE); Faculté des Sciences de la Santé, Cotonou, Bénin.
J MiletIRD, UMR 216, Centre d'Etude et de Recherche sur le Paludisme Associé à la Grossesse et à l'Enfance (CERPAGE); Faculté des Sciences de la Santé, Cotonou, Bénin.
J D MassaroDivision of Clinical Immunology, School of Medicine of Ribeirão Preto, University of São Paulo, São Paulo, Brazil.
H LaayouniInstitute of Evolutionary Biology, CEXS-UPF-PRBB, Catalonia, Barcelona, Spain.
P Moreau1] CEA, Service de Recherches en Hémato-Immunologie, iMETI, Hôpital Saint-Louis, Paris, France [2] Université Paris Diderot, Sorbonne Paris Cité, UMR E5, Institut Universitaire d'Hématologie, Hôpital Saint-Louis, Paris, France.
E A DonadiDivision of Clinical Immunology, School of Medicine of Ribeirão Preto, University of São Paulo, São Paulo, Brazil.
A Garcia1] Institut de Recherche pour le Développement, UMR 216 Mère et enfant face aux infections tropicales, Paris, France [2] Faculté de Pharmacie, Université Paris Descartes, Sorbonne Paris Cité, Paris, France.
Institut de Biologia Evolutiva · ESUniversidade de São Paulo · BRUniversité des Sciences de la Santé · GAUniversité Paris Cité · FRHôpital Saint-Louis · FRInstitut de Recherche pour le Développement · FRUniversidade Estadual Paulista (Unesp) · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The HLA-G (human leukocyte antigen-G) molecule plays a pivotal role in immune tolerance by inhibiting different cell subsets involved in both innate and adaptive immunity. Besides its primary function in maintaining the maternal-fetal tolerance, HLA-G has been involved in a wide range of pathological conditions where it can be either favorable or detrimental to the patient, depending on the nature of the pathology. Although several studies have demonstrated the utmost importance of the 3' untranslated region (3'UTR) in the HLA-G expression profile, limited data exist on the sequence variability of this gene region in human populations. In this study, we characterized the genetic diversity and haplotype structure of the HLA-G 3'UTR by resequencing 444 individuals from three sub-Saharan African populations and retrieving data from the 1000 Genomes project and the literature. A total of 1936 individuals representing 21 worldwide populations were combined and jointly analyzed. Our data revealed a high level of nucleotide diversity, an excess of intermediate frequency variants and an extremely low population differentiation, strongly supporting a history of balancing selection at this locus. The 14-bp insertion/deletion polymorphism was further pointed out as the likely target of selection, emphasizing its potential role in the post-transcriptional regulation of HLA-G expression.

Indexed as

3' Untranslated RegionsAfricaAmericasAsiaBase SequenceEthnicityEuropeFemaleGene FrequencyHaplotypesHLA-G AntigensHumansImmune ToleranceINDEL MutationLinkage DisequilibriumMale3' Untranslated RegionsHLA-G Antigens

Identifiers

PMID24352166
OpenAlexW2069032846

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.