Evidence map›Paper›PMID 24350581›Full record

ArticleJournal of the American Chemical Society2014

Circular permutation of a WW domain: folding still occurs after excising the turn of the folding-nucleating hairpin.

Brandon L Kier, Jordan M Anderson, Niels H Andersen

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. An Engineered β-Hairpin Peptide Forming Thermostable Complexes with ZnChembiochem : a European journal of chemical biology · 2023
    Article
  2. Article
  3. Article
  4. A pH Switch for β-Sheet Protein Folding.Angewandte Chemie (International ed. in English) · 2017
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Brandon L KierDepartment of Chemistry, University of Washington , Seattle, Washington 98195, United States.
Jordan M Anderson
Niels H Andersen

Funding

Exploring Protein Folding Landscapes by Circular PermutationR01GM099889 · NIGMS · UNIVERSITY OF WASHINGTON · PI ANDERSEN, NIELS HJORTH · 2012 to 2015
$1.0M
NIGMS NIH HHS GM099889NIGMS NIH HHS R01 GM099889
6 · The paper itself

Abstract

A hyperstable Pin1 WW domain has been circularly permuted via excision of the fold-nucleating turn; it still folds to form the native three-strand sheet and hydrophobic core features. Multiprobe folding dynamics studies of the normal and circularly permuted sequences, as well as their constituent hairpin fragments and comparable-length β-strand-loop-β-strand models, indicate 2-state folding for all topologies. N-terminal hairpin formation is the fold nucleating event for the wild-type sequence; the slower folding circular permutant has a more distributed folding transition state.

Indexed as

Hydrophobic and Hydrophilic InteractionsModels, MolecularPeptidesProtein FoldingProtein Structure, SecondaryThermodynamicsPeptides

Identifiers

PMID24350581
PMCPMC4051316

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.