Evidence map›Paper›PMID 24349343›Full record

ArticlePloS one2013

An automated blur detection method for histological whole slide imaging.

Xavier Moles Lopez, Etienne D'Andrea, Paul Barbot, Anne-Sophie Bridoux, Sandrine Rorive, Isabelle Salmon, Olivier Debeir, Christine Decaestecker

Abstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. [Artificial intelligence for pathology-how, where, and why?]Pathologie (Heidelberg, Germany) · 2024
    Article
  3. Article
  4. Review
  5. Computational pathology in ovarian cancer.Frontiers in oncology · 2022
    Review
  6. Review
  7. Review
  8. Article
  9. Towards machine learned quality control: A benchmark for sharpness quantification in digital pathology.Computerized medical imaging and graphics : the official journal of the Computerized Medical Imaging Society · 2018
    Article
  10. Article
  11. Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Xavier Moles LopezLaboratories of Image, Signal processing and Acoustics (LISA), Université Libre de Bruxelles, Brussels, Belgium ; DIAPath - Center for Microscopy and Molecular Imaging, Université Libre de Bruxelles, Gosselies, Belgium.
Etienne D'AndreaLaboratories of Image, Signal processing and Acoustics (LISA), Université Libre de Bruxelles, Brussels, Belgium ; DIAPath - Center for Microscopy and Molecular Imaging, Université Libre de Bruxelles, Gosselies, Belgium.
Paul BarbotDIAPath - Center for Microscopy and Molecular Imaging, Université Libre de Bruxelles, Gosselies, Belgium.
Anne-Sophie BridouxDIAPath - Center for Microscopy and Molecular Imaging, Université Libre de Bruxelles, Gosselies, Belgium.
Sandrine RoriveDIAPath - Center for Microscopy and Molecular Imaging, Université Libre de Bruxelles, Gosselies, Belgium ; Department of Pathology - Erasme Hospital, Université Libre de Bruxelles, Brussels, Belgium.
Isabelle SalmonDIAPath - Center for Microscopy and Molecular Imaging, Université Libre de Bruxelles, Gosselies, Belgium ; Department of Pathology - Erasme Hospital, Université Libre de Bruxelles, Brussels, Belgium.
Olivier DebeirLaboratories of Image, Signal processing and Acoustics (LISA), Université Libre de Bruxelles, Brussels, Belgium.
Christine DecaesteckerLaboratories of Image, Signal processing and Acoustics (LISA), Université Libre de Bruxelles, Brussels, Belgium ; DIAPath - Center for Microscopy and Molecular Imaging, Université Libre de Bruxelles, Gosselies, Belgium.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Whole slide scanners are novel devices that enable high-resolution imaging of an entire histological slide. Furthermore, the imaging is achieved in only a few minutes, which enables image rendering of large-scale studies involving multiple immunohistochemistry biomarkers. Although whole slide imaging has improved considerably, locally poor focusing causes blurred regions of the image. These artifacts may strongly affect the quality of subsequent analyses, making a slide review process mandatory. This tedious and time-consuming task requires the scanner operator to carefully assess the virtual slide and to manually select new focus points. We propose a statistical learning method that provides early image quality feedback and automatically identifies regions of the image that require additional focus points.

Indexed as

ArtifactsImmunohistochemistryBiomarkersHumansImage Processing, Computer-AssistedReproducibility of ResultsBiomarkers

Identifiers

PMID24349343
PMCPMC3862630

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.