Evidence map›Paper›PMID 24349272›Full record

ArticlePloS one2013

Efficient isolation of pure and functional mitochondria from mouse tissues using automated tissue disruption and enrichment with anti-TOM22 magnetic beads.

Andras Franko, Olivier R Baris, Eva Bergschneider, Christine von Toerne, Stefanie M Hauck, Michaela Aichler, Axel K Walch, Wolfgang Wurst, Rudolf J Wiesner, Ian C D Johnston and 1 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 95 citations in OpenAlex.

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  12. Purification of mitochondria from skeletal muscle tissue for transcriptomic analyses reveals localization of nuclear-encoded noncoding RNAs.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2024
    Article
  13. Guidelines for mitochondrial RNA analysis.Molecular therapy. Nucleic acids · 2024
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  18. Isolation of Functional Mitochondria and Pure mtDNA from Murine Tissues.Methods in molecular biology (Clifton, N.J.) · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 1 country.

Andras FrankoInstitute of Experimental Genetics, Helmholtz Zentrum München, German Research Center for Environmental Health, Neuherberg, Germany.
Olivier R BarisInstitute of Vegetative Physiology, Medical Faculty, University of Köln, Köln, Germany.
Eva BergschneiderMiltenyi Biotec GmbH, Bergisch Gladbach, Germany.
Christine von ToerneResearch Unit Protein Science, Helmholtz Zentrum München, German Research Center for Environmental Health, Neuherberg, Germany.
Stefanie M HauckResearch Unit Protein Science, Helmholtz Zentrum München, German Research Center for Environmental Health, Neuherberg, Germany.
Michaela AichlerResearch Unit Analytical Pathology, Institute of Pathology, Helmholtz Zentrum München, German Research Center for Environmental Health, Neuherberg, Germany.
Axel K WalchResearch Unit Analytical Pathology, Institute of Pathology, Helmholtz Zentrum München, German Research Center for Environmental Health, Neuherberg, Germany.
Wolfgang WurstInstitute of Developmental Genetics, Helmholtz Zentrum München, Technische Universität München, Neuherberg, Germany ; Max Planck Institute of Psychiatry, Munich, Germany ; Technische Universität München, Lehrstuhl für Entwicklungsgenetik, c/o Helmholtz Zentrum München, Neuherberg, Germany ; DZNE - Deutsches Zentrum fuer Neurodegenerative Erkrankungen, Site Munich, Germany.
Rudolf J WiesnerInstitute of Vegetative Physiology, Medical Faculty, University of Köln, Köln, Germany ; Center for Molecular Medicine (CMMC), University of Köln, Köln, Germany ; Cologne Excellence Cluster on Cellular Stress Responses in Ageing-associated Diseases (CECAD), University of Köln, Köln, Germany.
Ian C D JohnstonMiltenyi Biotec GmbH, Bergisch Gladbach, Germany.
Martin Hrabĕ de AngelisInstitute of Experimental Genetics, Helmholtz Zentrum München, German Research Center for Environmental Health, Neuherberg, Germany ; Technische Universität München, WZW - Center of Life and Food Science Weihenstephan, Chair of Experimental Genetics, Freising-Weihenstephan, Germany ; German Center for Diabetes Research (DZD), Neuherberg, Germany.
Helmholtz Zentrum München · DEMiltenyi Biotec (Germany) · DECologne Excellence Cluster on Cellular Stress Responses in Aging Associated Diseases · DEHeinrich Heine University Düsseldorf · DETechnical University of Munich · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To better understand molecular mechanisms regulating changes in metabolism, as observed e.g. in diabetes or neuronal disorders, the function of mitochondria needs to be precisely determined. The usual isolation methods such as differential centrifugation result in isolates of highly variable quality and quantity. To fulfill the need of a reproducible isolation method from solid tissues, which is suitable to handle parallel samples simultaneously, we developed a protocol based on anti-TOM22 (translocase of outer mitochondrial membrane 22 homolog) antibody-coupled magnetic beads. To measure oxygen consumption rate in isolated mitochondria from various mouse tissues, a traditional Clark electrode and the high-throughput XF Extracellular Flux Analyzer were used. Furthermore, Western blots, transmission electron microscopic and proteomic studies were performed to analyze the purity and integrity of the mitochondrial preparations. Mitochondrial fractions isolated from liver, brain and skeletal muscle by anti-TOM22 magnetic beads showed oxygen consumption capacities comparable to previously reported values and little contamination with other organelles. The purity and quality of isolated mitochondria using anti-TOM22 magnetic beads was compared to traditional differential centrifugation protocol in liver and the results indicated an obvious advantage of the magnetic beads method compared to the traditional differential centrifugation technique.

Indexed as

Magnetic PhenomenaMicrospheresOrgan SpecificityAnimalsAutomationCell FractionationCentrifugationMiceMitochondriaMitochondria, LiverMitochondrial Membrane Transport ProteinsMitochondria, MuscleOxygen ConsumptionSubcellular FractionsMitochondrial Membrane Transport Proteins

Identifiers

PMID24349272
PMCPMC3861405
OpenAlexW2094244157

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.