Evidence map›Paper›PMID 24348917›Full record

ArticlePloS one2013

Stress responses of the industrial workhorse Bacillus licheniformis to osmotic challenges.

Rebecca Schroeter, Tamara Hoffmann, Birgit Voigt, Hanna Meyer, Monika Bleisteiner, Jan Muntel, Britta Jürgen, Dirk Albrecht, Dörte Becher, Michael Lalk and 7 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 57 citations in OpenAlex.

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  4. Mechanism of Salt Tolerance and Plant Growth Promotion inInternational journal of molecular sciences · 2023
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  8. L-Proline Synthesis Mutants ofFrontiers in microbiology · 2022
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  14. Degeneration of industrial bacteria caused by genetic instability.World journal of microbiology & biotechnology · 2020
    Review
  15. Article
  16. Article
  17. Transcriptional Changes in the Xylose Operon inInternational journal of molecular sciences · 2019
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 6 institutions in 2 countries.

Rebecca SchroeterPharmaceutical Biotechnology, Institute of Pharmacy, University of Greifswald, Greifswald, Germany.
Tamara HoffmannLaboratory for Microbiology, Department of Biology, University Marburg, Marburg, Germany ; LOEWE-Center for Synthetic Microbiology, University Marburg, Marburg, Germany.
Birgit VoigtInstitute for Microbiology, University of Greifswald, Greifswald, Germany.
Hanna MeyerInstitute of Biochemistry, University of Greifswald, Greifswald, Germany.
Monika BleisteinerLaboratory for Microbiology, Department of Biology, University Marburg, Marburg, Germany.
Jan MuntelInstitute for Microbiology, University of Greifswald, Greifswald, Germany.
Britta JürgenPharmaceutical Biotechnology, Institute of Pharmacy, University of Greifswald, Greifswald, Germany.
Dirk AlbrechtInstitute for Microbiology, University of Greifswald, Greifswald, Germany.
Dörte BecherInstitute for Microbiology, University of Greifswald, Greifswald, Germany.
Michael LalkInstitute of Biochemistry, University of Greifswald, Greifswald, Germany.
Stefan EversHenkel AG & Co. KGaA, Düsseldorf, Germany.
Johannes BongaertsHenkel AG & Co. KGaA, Düsseldorf, Germany.
Karl-Heinz MaurerAB Enzymes GmbH, Darmstadt, Germany.
Harald PutzerCNRS UPR 9073 (Affiliated with Université Paris Diderot, Sorbonne Paris Cité), Institute de Biologie Physico-Chimique, Paris, France.
Michael HeckerInstitute for Microbiology, University of Greifswald, Greifswald, Germany.
Thomas SchwederPharmaceutical Biotechnology, Institute of Pharmacy, University of Greifswald, Greifswald, Germany.
Erhard BremerLaboratory for Microbiology, Department of Biology, University Marburg, Marburg, Germany ; LOEWE-Center for Synthetic Microbiology, University Marburg, Marburg, Germany.
Universität Greifswald · DEHenkel (Germany) · DEPhilipps University of Marburg · DEABEnzymes (Germany) · DEInstitut de Biologie Physico-Chimique · FRLoewe Center for Synthetic Microbiology · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Gram-positive endospore-forming bacterium Bacillus licheniformis can be found widely in nature and it is exploited in industrial processes for the manufacturing of antibiotics, specialty chemicals, and enzymes. Both in its varied natural habitats and in industrial settings, B. licheniformis cells will be exposed to increases in the external osmolarity, conditions that trigger water efflux, impair turgor, cause the cessation of growth, and negatively affect the productivity of cell factories in biotechnological processes. We have taken here both systems-wide and targeted physiological approaches to unravel the core of the osmostress responses of B. licheniformis. Cells were suddenly subjected to an osmotic upshift of considerable magnitude (with 1 M NaCl), and their transcriptional profile was then recorded in a time-resolved fashion on a genome-wide scale. A bioinformatics cluster analysis was used to group the osmotically up-regulated genes into categories that are functionally associated with the synthesis and import of osmostress-relieving compounds (compatible solutes), the SigB-controlled general stress response, and genes whose functional annotation suggests that salt stress triggers secondary oxidative stress responses in B. licheniformis. The data set focusing on the transcriptional profile of B. licheniformis was enriched by proteomics aimed at identifying those proteins that were accumulated by the cells through increased biosynthesis in response to osmotic stress. Furthermore, these global approaches were augmented by a set of experiments that addressed the synthesis of the compatible solutes proline and glycine betaine and assessed the growth-enhancing effects of various osmoprotectants. Combined, our data provide a blueprint of the cellular adjustment processes of B. licheniformis to both sudden and sustained osmotic stress.

Indexed as

BacillusBetaineGene Expression Regulation, BacterialOsmotic PressureOxidative StressBetaine

Identifiers

PMID24348917
PMCPMC3858371
OpenAlexW2093163777

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.