Evidence map›Paper›PMID 24348511›Full record

ReviewFrontiers in genetics2013

Regulation of the transcriptome by ER stress: non-canonical mechanisms and physiological consequences.

Angela M Arensdorf, Danilo Diedrichs, D Thomas Rutkowski

Open access · goldAbstract readReview
In one paragraph

Review in Frontiers in genetics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed, 1 pooled it
3.1field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 1 synthesis or guideline pooled it, 75 citations in OpenAlex.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Angela M ArensdorfDepartment of Anatomy and Cell Biology, University of Iowa Carver College of Medicine Iowa City, IA, USA.
Danilo DiedrichsDepartment of Mathematics and Computer Science, Wheaton College Wheaton, IL, USA.
D Thomas RutkowskiDepartment of Anatomy and Cell Biology, University of Iowa Carver College of Medicine Iowa City, IA, USA ; Department of Internal Medicine, University of Iowa Carver College of Medicine Iowa City, IA, USA.
University of Iowa · USWheaton College - Illinois · US

Funding

Mechanisms of ER stress - induced fatty liverR01DK084058 · NIDDK · UNIVERSITY OF IOWA · PI RUTKOWSKI, DAVID THOMAS · 2009 to 2013
$1.5M
NIDDK NIH HHS R01 DK084058
6 · The paper itself

Abstract

The mammalian unfolded protein response (UPR) is propagated by three ER-resident transmembrane proteins, each of which initiates a signaling cascade that ultimately culminates in production of a transcriptional activator. The UPR was originally characterized as a pathway for upregulating ER chaperones, and a comprehensive body of subsequent work has shown that protein synthesis, folding, oxidation, trafficking, and degradation are all transcriptionally enhanced by the UPR. However, the global reach of the UPR extends to genes involved in diverse physiological processes having seemingly little to do with ER protein folding, and this includes a substantial number of mRNAs that are suppressed by stress rather than stimulated. Through multiple non-canonical mechanisms emanating from each of the UPR pathways, the cell dynamically regulates transcription and mRNA degradation. Here we highlight these mechanisms and their increasingly appreciated impact on physiological processes.

Indexed as

ER stressgene regulatory networks (GRN)mRNA stabilityTranscription Factorsunfolded protein response (UPR)

Identifiers

PMID24348511
PMCPMC3844873
OpenAlexW1979810053

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.