Evidence map›Paper›PMID 24348252›Full record

ArticlePLoS pathogens2013

The genetic basis of Escherichia coli pathoadaptation to macrophages.

Migla Miskinyte, Ana Sousa, Ricardo S Ramiro, Jorge A Moura de Sousa, Jerzy Kotlinowski, Iris Caramalho, Sara Magalhães, Miguel P Soares, Isabel Gordo

Abstract read
In one paragraph

Article in PLoS pathogens, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Genetically Engineered Microorganisms and Their Impact on Human Health.International journal of clinical practice · 2024
    Review
  9. Intrahost evolution of the gut microbiota.Nature reviews. Microbiology · 2023
    Review
  10. Article
  11. Intracellular Experimental Evolution ofACS infectious diseases · 2023
    Article
  12. Interactions between host epithelial cells andEmerging microbes & infections · 2022
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Migla MiskinyteInstituto Gulbenkian de Ciência, Oeiras, Portugal.
Ana SousaInstituto Gulbenkian de Ciência, Oeiras, Portugal.
Ricardo S RamiroInstituto Gulbenkian de Ciência, Oeiras, Portugal.
Jorge A Moura de SousaInstituto Gulbenkian de Ciência, Oeiras, Portugal.
Jerzy KotlinowskiInstituto Gulbenkian de Ciência, Oeiras, Portugal.
Iris CaramalhoInstituto Gulbenkian de Ciência, Oeiras, Portugal ; Unidade de Imunologia Clínica, Instituto de Medicina Molecular, Faculdade de Medicina da Universidade de Lisboa, Lisboa, Portugal.
Sara MagalhãesCentro Biologia Ambiental, Faculdade de Ciências da Universidade de Lisboa, Lisboa, Portugal.
Miguel P SoaresInstituto Gulbenkian de Ciência, Oeiras, Portugal.
Isabel GordoInstituto Gulbenkian de Ciência, Oeiras, Portugal.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Antagonistic interactions are likely important driving forces of the evolutionary process underlying bacterial genome complexity and diversity. We hypothesized that the ability of evolved bacteria to escape specific components of host innate immunity, such as phagocytosis and killing by macrophages (MΦ), is a critical trait relevant in the acquisition of bacterial virulence. Here, we used a combination of experimental evolution, phenotypic characterization, genome sequencing and mathematical modeling to address how fast, and through how many adaptive steps, a commensal Escherichia coli (E. coli) acquire this virulence trait. We show that when maintained in vitro under the selective pressure of host MΦ commensal E. coli can evolve, in less than 500 generations, virulent clones that escape phagocytosis and MΦ killing in vitro, while increasing their pathogenicity in vivo, as assessed in mice. This pathoadaptive process is driven by a mechanism involving the insertion of a single transposable element into the promoter region of the E. coli yrfF gene. Moreover, transposition of the IS186 element into the promoter of Lon gene, encoding an ATP-dependent serine protease, is likely to accelerate this pathoadaptive process. Competition between clones carrying distinct beneficial mutations dominates the dynamics of the pathoadaptive process, as suggested from a mathematical model, which reproduces the observed experimental dynamics of E. coli evolution towards virulence. In conclusion, we reveal a molecular mechanism explaining how a specific component of host innate immunity can modulate microbial evolution towards pathogenicity.

Indexed as

Adaptation, BiologicalAnimalsCells, CulturedEscherichia coliGenetic FitnessGenetic VariationHIV InfectionsImmune EvasionImmunity, InnateMacrophagesMaleMiceMice, Inbred C57BLPhenotypeVirulence

Identifiers

PMID24348252
PMCPMC3861542

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.