Evidence map›Paper›PMID 24348209›Full record

ReviewThe Yale journal of biology and medicine2013

Investigations of homologous recombination pathways and their regulation.

James M Daley, YoungHo Kwon, Hengyao Niu, Patrick Sung

Open access · greenAbstract readReview
In one paragraph

Review in The Yale journal of biology and medicine, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 47 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. CRISPR/Cas Technology in Pig-to-Human Xenotransplantation Research.International journal of molecular sciences · 2021
    Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Genes · 2020
    Review
  12. Roles of OB-Fold Proteins in Replication Stress.Frontiers in cell and developmental biology · 2020
    Review
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. High expression of Rad51c predicts poor prognostic outcome and induces cell resistance to cisplatin and radiation in non-small cell lung cancer.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

James M DaleyMolecular Biophysics & Biochemistry, Yale School of Medicine, New Haven, Connecticut.
YoungHo KwonMolecular Biophysics & Biochemistry, Yale School of Medicine, New Haven, Connecticut.
Hengyao NiuMolecular Biophysics & Biochemistry, Yale School of Medicine, New Haven, Connecticut.
Patrick SungMolecular Biophysics & Biochemistry, Yale School of Medicine, New Haven, Connecticut.
Yale University · US

Funding

Transcription-Coupled & Replication-Associated Excision RepairP01CA092584 · NCI · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI John A. Tainer · 2001 to 2026
$89.6M
Mechanistic Dissection of the Fanconi Anemia Pathway of DNA Damage Response and RR01CA168635 · NCI · YALE UNIVERSITY · PI Gary M Kupfer, Patrick Sung · 2013 to 2026
$5.8M
FORMATION AND RESOLUTION OF RECOMBINATION INTERMEDIATESR01GM057814 · NIGMS · YALE UNIVERSITY · PI SUNG, PATRICK · 1999 to 2016
$4.2M
Roles of the RecQ Helicases BLM and RECQ5 in Genome MaintenanceR01ES015632 · NIEHS · YALE UNIVERSITY · PI SUNG, PATRICK · 2007 to 2017
$3.9M
NCI NIH HHS P01 CA092584NCI NIH HHS R01 CA168635NIEHS NIH HHS R01 ES015632NIGMS NIH HHS R01 GM057814
6 · The paper itself

Abstract

The DNA double-strand break (DSB), arising from exposure to ionizing radiation or various chemotherapeutic agents or from replication fork collapse, is among the most dangerous of chromosomal lesions. DSBs are highly cytotoxic and can lead to translocations, deletions, duplications, or mutations if mishandled. DSBs are eliminated by either homologous recombination (HR), which uses a homologous template to guide accurate repair, or by nonhomologous end joining (NHEJ), which simply rejoins the two broken ends after damaged nucleotides have been removed. HR generates error-free repair products and is also required for generating chromosome arm crossovers between homologous chromosomes in meiotic cells. The HR reaction includes several distinct steps: resection of DNA ends, homologous DNA pairing, DNA synthesis, and processing of HR intermediates. Each occurs in a highly regulated fashion utilizing multiple protein factors. These steps are being elucidated using a combination of genetic tools, cell-based assays, and in vitro reconstitution with highly purified HR proteins. In this review, we summarize contributions from our laboratory at Yale University in understanding HR mechanisms in eukaryotic cells.

Indexed as

DNA Breaks, Double-StrandedHomologous RecombinationDNA-Binding ProteinsDNA, CruciformDNA RepairHumansModels, GeneticRad51 RecombinaseSaccharomyces cerevisiaeSignal TransductionDNA-Binding ProteinsDNA, CruciformRad51 RecombinaseDNA repairdouble Holliday junctiondouble-strand breakshomologous recombinationpresynaptic filamentrecombinaseresectionsynaptic complex

Identifiers

PMID24348209
PMCPMC3848099
OpenAlexW2228001583

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.