Evidence map›Paper›PMID 24344309›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2014

Nucleolin is important for Epstein-Barr virus nuclear antigen 1-mediated episome binding, maintenance, and transcription.

Ya-Lin Chen, Cheng-Der Liu, Chi-Ping Cheng, Bo Zhao, Hao-Jen Hsu, Chih-Long Shen, Shu-Jun Chiu, Elliott Kieff, Chih-wen Peng

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 44 citations in OpenAlex.

  1. Review
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  4. Nucleolin binds to and regulates transcription of hepatitis B virus covalently closed circular DNA minichromosome.Proceedings of the National Academy of Sciences of the United States of America · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Ya-Lin ChenDepartment of Life Sciences, Tzu-Chi University, Hualien 97004, Taiwan.
Cheng-Der Liu
Chi-Ping Cheng
Bo Zhao
Hao-Jen Hsu
Chih-Long Shen
Shu-Jun Chiu
Elliott Kieff
Chih-wen Peng
Tzu Chi University · TWBrigham and Women's Hospital · US

Funding

Epstein-Barr Virus Nuclear Proteins in B Cell Growth TransformationR01CA047006 · NCI · BRIGHAM AND WOMEN'S HOSPITAL · PI ZHAO, BO · 2002 to 2021
$12.1M
Epstein-Barr Virus LMP-1 Mediated OncongenicityR01CA085180 · NCI · BRIGHAM AND WOMEN'S HOSPITAL · PI KIEFF, ELLIOTT D · 2000 to 2016
$10.6M
Roles of Epstein-Barr virus nuclear antigens 2 and LP in B cell proliferationR01CA170023 · NCI · BRIGHAM AND WOMEN'S HOSPITAL · PI ZHAO, BO · 2013 to 2017
$1.9M
Inhibitors of Epstein-Barr Virus Nuclear Protein 1 Mediated Latent InfectionR01CA131354 · NCI · BRIGHAM AND WOMEN'S HOSPITAL · PI KIEFF, ELLIOTT D · 2009 to 2013
$1.8M
NCI NIH HHS R01 CA047006NCI NIH HHS R01CA047006NCI NIH HHS R01 CA085180NCI NIH HHS R01CA085180NCI NIH HHS R01 CA131354NCI NIH HHS R01CA131354NCI NIH HHS R01 CA170023NCI NIH HHS R01CA170023
6 · The paper itself

Abstract

Epstein-Barr virus (EBV) nuclear antigen 1 (EBNA1) is essential for EBV episome maintenance, replication, and transcription. These effects are mediated by EBNA1 binding to cognate oriP DNA, which comprise 20 imperfect copies of a 30-bp dyad symmetry enhancer and an origin for DNA replication. To identify cell proteins essential for these EBNA1 functions, EBNA1 associated cell proteins were immune precipitated and analyzed by liquid chromatography-tandem mass spectrometry. Nucleolin (NCL) was identified to be EBNA1 associated. EBNA1's N-terminal 100 aa and NCL's RNA-binding domains were critical for EBNA1/NCL interaction. Lentivirus shRNA-mediated NCL depletion substantially reduced EBNA1 recruitment to oriP DNA, EBNA1-dependent transcription of an EBV oriP luciferase reporter, and EBV genome maintenance in lymphoblastoid cell lines. NCL RNA-binding domain K429 was critical for ATP and EBNA1 binding. NCL overexpression increased EBNA1 binding to oriP and transcription, whereas NCL K429A was deficient. Moreover, NCL silencing impaired lymphoblastoid cell line growth. These experiments reveal a surprisingly critical role for NCL K429 in EBNA1 episome maintenance and transcription, which may be a target for therapeutic intervention.

Indexed as

Transcription, GeneticAdenosine TriphosphateBinding SitesCell Line, TumorCell NucleusChromatography, LiquidDNA ReplicationEpitopesEpstein-Barr Virus Nuclear AntigensGene Expression RegulationGene SilencingGenomeGreen Fluorescent ProteinsHumansImmunoprecipitationLuciferasesAdenosine TriphosphateEBV-encoded nuclear antigen 1EpitopesEpstein-Barr Virus Nuclear AntigensGreen Fluorescent ProteinsLuciferasesNucleolinPhosphoproteinsRNA-Binding Proteinschromatinlymphomanasopharyngeal carcinomaoncogenic herpesvirus

Identifiers

PMID24344309
PMCPMC3890893
OpenAlexW2160894296

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.