Evidence map›Paper›PMID 24344262›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2014

Dynamic control of β1 integrin adhesion by the plexinD1-sema3E axis.

Young I Choi, Jonathan S Duke-Cohan, Wei Chen, Baoyu Liu, Jérémie Rossy, Thibault Tabarin, Lining Ju, Jingang Gui, Katharina Gaus, Cheng Zhu and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 76 citations in OpenAlex.

  1. Sema3E-plexinD1 Axis Is a Modulator of Foxp3FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2026
    Article
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  11. What's the Catch? The Significance of Catch Bonds in T Cell Activation.Journal of immunology (Baltimore, Md. : 1950) · 2023
    Review
  12. Article
  13. Review
  14. Article
  15. Review
  16. Review
  17. Semaphorin3E/plexinD1 Axis in Asthma: What We Know So Far!Advances in experimental medicine and biology · 2021
    Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 3 countries.

Young I ChoiLaboratory of Immunobiology and Department of Medical Oncology, Dana-Farber Cancer Institute and Department of Medicine, Harvard Medical School, Boston, MA 02115.
Jonathan S Duke-Cohan
Wei Chen
Baoyu Liu
Jérémie Rossy
Thibault Tabarin
Lining Ju
Jingang Gui
Katharina Gaus
Cheng Zhu
Ellis L Reinherz
Dana-Farber Cancer Institute · USGeorgia Institute of Technology · USUNSW Sydney · AUPulmonary Vascular Research Institute · GB

Funding

Visualizing Single Integrin Conformational Changes on Living CellsR01AI044902 · NIAID · GEORGIA INSTITUTE OF TECHNOLOGY · PI ZHU, CHENG · 2000 to 2016
$5.8M
T CELL ANTIGEN RECOGNITIONR37AI019807 · NIAID · DANA-FARBER CANCER INSTITUTE · PI REINHERZ, ELLIS L · 1999 to 2008
$4.4M
Thymocyte integrin regulation by plexinD1R01AI115698 · NIAID · DANA-FARBER CANCER INST · PI REINHERZ, ELLIS L · 2015 to 2018
$1.7M
T Cell Antigen RecognitionR01AI019807 · NIAID · DANA-FARBER CANCER INSTITUTE · PI REINHERZ, ELLIS L · 1985 to 2010
$1.3M
PlexinD1-regulated intrathymic movementR21AI092378 · NIAID · DANA-FARBER CANCER INST · PI CHOI, YOUNG IL · 2011 to 2012
$446k
T Cell Antigen RecognitionR56AI019807 · NIAID · DANA-FARBER CANCER INST · PI REINHERZ, ELLIS L · 2012 to 2012
$430k
KINETIC PROPERTIES OF SELECTINSR21AI044902 · NIAID · GEORGIA INSTITUTE OF TECHNOLOGY · PI ZHU, CHENG · 2000 to 2000
$71k
NIAID NIH HHS AI19807NIAID NIH HHS AI44902NIAID NIH HHS AI92378NIAID NIH HHS R01 AI019807NIAID NIH HHS R01 AI044902NIAID NIH HHS R01 AI115698NIAID NIH HHS R21 AI044902NIAID NIH HHS R21 AI092378NIAID NIH HHS R37 AI019807NIAID NIH HHS R56 AI019807
6 · The paper itself

Abstract

Plexins and semaphorins comprise a large family of receptor-ligand pairs controlling cell guidance in nervous, immune, and vascular systems. How plexin regulation of neurite outgrowth, lymphoid trafficking, and vascular endothelial cell branching is linked to integrin function, central to most directed movement, remains unclear. Here we show that on developing thymocytes, plexinD1 controls surface topology of nanometer-scaled β1 integrin adhesion domains in cis, whereas its ligation by sema3E in trans regulates individual β1 integrin catch bonds. Loss of plexinD1 expression reduces β1 integrin clustering, thereby diminishing avidity, whereas sema3E ligation shortens individual integrin bond lifetimes under force to reduce stability. Consequently, both decreased expression of plexinD1 during developmental progression and a thymic medulla-emanating sema3E gradient enhance thymocyte movement toward the medulla, thus enforcing the orchestrated lymphoid trafficking required for effective immune repertoire selection. Our results demonstrate plexin-tunable molecular features of integrin adhesion with broad implications for many cellular processes.

Indexed as

Gene Expression RegulationAnimalsAutoantibodiesCell AdhesionCell Adhesion Molecules, NeuronalChemokinesChemotaxisCytoskeletal ProteinsGlycoproteinsIntegrin beta1IntegrinsIntracellular Signaling Peptides and ProteinsLigandsMembrane GlycoproteinsMembrane ProteinsMiceAutoantibodiesCell Adhesion Molecules, NeuronalChemokinesCytoskeletal ProteinsGlycoproteinsIntegrin beta1IntegrinsIntracellular Signaling Peptides and ProteinsLigandsMembrane GlycoproteinsMembrane ProteinsNerve Tissue ProteinsPlxnd1 protein, mouseSema3e protein, mouseSemaphorinsautoimmunitycentral toleranceintegrin activationmechanobiologythymocyte development

Identifiers

PMID24344262
PMCPMC3890783
OpenAlexW2008444129

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.