Evidence map›Paper›PMID 24344201›Full record

ArticleMolecular and cellular biology2014

Phosphorylation-regulated transitions in an oligomeric state control the activity of the Sae2 DNA repair enzyme.

Qiong Fu, Julia Chow, Kara A Bernstein, Nodar Makharashvili, Sucheta Arora, Chia-Fang Lee, Maria D Person, Rodney Rothstein, Tanya T Paull

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in Molecular and cellular biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 44 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
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  6. CtIP promotes the motor activity of DNA2 to accelerate long-range DNA end resection.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  7. Review
  8. Article
  9. Article
  10. Review
  11. Sae2 antagonizes Rad9 accumulation at DNA double-strand breaks to attenuate checkpoint signaling and facilitate end resection.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  12. Article
  13. Review
  14. Article
  15. Review
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  17. Article
  18. Review
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4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

9 authors at 3 institutions in 3 countries.

Qiong FuThe Howard Hughes Medical Institute, Department of Molecular Biosciences, and Institute for Cellular and Molecular Biology, The University of Texas at Austin, Austin, Texas, USA.
Julia Chow
Kara A Bernstein
Nodar Makharashvili
Sucheta Arora
Chia-Fang Lee
Maria D Person
Rodney Rothstein
Tanya T Paull
Howard Hughes Medical Institute · USColumbia University Irving Medical Center · USInstitut de Biologie Moléculaire et Cellulaire · FR

Funding

Genetics of the formation of repair &reombination fociR01GM067055 · NIGMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI ROTHSTEIN, RODNEY J. · 2003 to 2014
$4.3M
Mrell/Rad50/Nbs1 and DNA double strand break repairR01CA094008 · NCI · UNIVERSITY OF TEXAS AUSTIN · PI PAULL, TANYA T · 2002 to 2011
$2.8M
Mechanistic insights into the SHU complex and Sgs1 in DNA repair and replicationR00GM088413 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI BERNSTEIN, KARA A · 2011 to 2013
$772k
Mechanistic insights into the SHU complex and Sgs1 in DNA repair and replicationK99GM088413 · NIGMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI BERNSTEIN, KARA A · 2009 to 2010
$180k
Howard Hughes Medical InstituteNCI NIH HHS CA094008NCI NIH HHS R01 CA094008NIGMS NIH HHS GM088413NIGMS NIH HHS GM67055NIGMS NIH HHS K99 GM088413NIGMS NIH HHS R00 GM088413NIGMS NIH HHS R01 GM067055
6 · The paper itself

Abstract

In the DNA damage response, many repair and signaling molecules mobilize rapidly at the sites of DNA double-strand breaks. This network of immediate responses is regulated at the level of posttranslational modifications that control the activation of DNA processing enzymes, protein kinases, and scaffold proteins to coordinate DNA repair and checkpoint signaling. Here we investigated the DNA damage-induced oligomeric transitions of the Sae2 protein, an important enzyme in the initiation of DNA double-strand break repair. Sae2 is a target of multiple phosphorylation events, which we identified and characterized in vivo in the budding yeast Saccharomyces cerevisiae. Both cell cycle-dependent and DNA damage-dependent phosphorylation sites in Sae2 are important for the survival of DNA damage, and the cell cycle-regulated modifications are required to prime the damage-dependent events. We found that Sae2 exists in the form of inactive oligomers that are transiently released into smaller active units by this series of phosphorylations. DNA damage also triggers removal of Sae2 through autophagy and proteasomal degradation, ensuring that active Sae2 is present only transiently in cells. Overall, this analysis provides evidence for a novel type of protein regulation where the activity of an enzyme is controlled dynamically by posttranslational modifications that regulate its solubility and oligomeric state.

Indexed as

AutophagyCell CycleDNA Breaks, Double-StrandedDNA RepairEndonucleasesIntracellular Signaling Peptides and ProteinsMutationPhosphorylationProteasome Endopeptidase ComplexProtein Serine-Threonine KinasesProteolysisSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsEndonucleasesIntracellular Signaling Peptides and ProteinsProteasome Endopeptidase ComplexProtein Serine-Threonine KinasesSaccharomyces cerevisiae ProteinsSAE2 protein, S cerevisiaeTEL1 protein, S cerevisiae

Identifiers

PMID24344201
PMCPMC4023830
OpenAlexW2109215807

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.