Evidence map›Paper›PMID 24342645›Full record

ArticleAntimicrobial agents and chemotherapy2014

Antibiotic streptolydigin requires noncatalytic Mg2+ for binding to RNA polymerase.

Savva Zorov, Yulia Yuzenkova, Vadim Nikiforov, Konstantin Severinov, Nikolay Zenkin

Open access · hybridAbstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.5field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 3 countries.

Savva ZorovCentre for Bacterial Cell Biology, Institute for Cell and Molecular Biosciences, Newcastle University, Newcastle upon Tyne, United Kingdom.
Yulia Yuzenkova
Vadim Nikiforov
Konstantin Severinov
Nikolay Zenkin
Newcastle University · GBRutgers, The State University of New Jersey · USPeter the Great St. Petersburg Polytechnic University · RU

Funding

Phage-induced modifications of RNA polymeraseR01GM059295 · NIGMS · RUTGERS THE ST UNIV OF NJ NEW BRUNSWICK · PI SEVERINOV, KONSTANTIN V · 1999 to 2013
$4.5M
Biotechnology and Biological Sciences Research Council BB/F006462/1Biotechnology and Biological Sciences Research Council BB/J006378/1European Research Council 202994NIGMS NIH HHS GM59295NIGMS NIH HHS R01 GM059295
6 · The paper itself

Abstract

Multisubunit RNA polymerase, an enzyme that accomplishes transcription in all living organisms, is a potent target for antibiotics. The antibiotic streptolydigin inhibits RNA polymerase by sequestering the active center in a catalytically inactive conformation. Here, we show that binding of streptolydigin to RNA polymerase strictly depends on a noncatalytic magnesium ion which is likely chelated by the aspartate of the bridge helix of the active center. Substitutions of this aspartate may explain different sensitivities of bacterial RNA polymerases to streptolydigin. These results provide the first evidence for the role of noncatalytic magnesium ions in the functioning of RNA polymerase and suggest new routes for the modification of existing and the design of new inhibitors of transcription.

Indexed as

AminoglycosidesAnti-Bacterial AgentsCatalytic DomainDNA-Directed RNA PolymerasesMagnesiumTaq PolymeraseThermus thermophilusAminoglycosidesAnti-Bacterial AgentsDNA-Directed RNA PolymerasesMagnesiumstreptolydiginTaq Polymerase

Identifiers

PMID24342645
PMCPMC3957892
OpenAlexW2109809991

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.