Evidence map›Paper›PMID 24342084›Full record

ReviewTrends in plant science2014

Ancient signals: comparative genomics of green plant CDPKs.

Louis-Philippe Hamel, Jen Sheen, Armand Séguin

Open access · greenAbstract readReview
In one paragraph

Review in Trends in plant science, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 86 papers.

0numbers the graph read from it
0cells of the map it votes in
86citing papers in PubMed
16.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

86 citing papers in PubMed, 171 citations in OpenAlex.

  1. Review
  2. Article
  3. Zea Maize Calmodulin (Plants (Basel, Switzerland) · 2025
    Article
  4. Article
  5. Review
  6. Article
  7. Comprehensive Genomic Analysis of thePlants (Basel, Switzerland) · 2025
    Article
  8. Article
  9. Genome-wide identification ofFrontiers in plant science · 2025
    Article
  10. Article
  11. Article
  12. Review
  13. Review
  14. Article
  15. Article
  16. Cadmium toxicity: its' uptake and retaliation by plant defence system and ja signaling.Biometals : an international journal on the role of metal ions in biology, biochemistry, and medicine · 2024
    Review
  17. DecodingPlants (Basel, Switzerland) · 2024
    Article
  18. Article
  19. Article
  20. Article

26 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 2 countries.

Louis-Philippe HamelDépartement de Biologie, Université de Sherbrooke, Sherbrooke, QC J1K 2R1, Canada. Electronic address: Louis-Philippe.Hamel@USherbrooke.ca.
Jen SheenDepartment of Molecular Biology and Center for Computational and Integrative Biology, Massachusetts General Hospital, Department of Genetics, Harvard Medical School, Boston, MA 02114, USA.
Armand SéguinNatural Resources Canada, Canadian Forest Service, Laurentian Forestry Centre, 1055 rue du P.E.P.S., P.O. Box 10380, Stn. Sainte-Foy, QC G1V 4C7, Canada. Electronic address: Armand.Seguin@RNCan-NRCan.gc.ca.
Massachusetts General Hospital · USNatural Resources Canada · CAUniversité de Sherbrooke · CA

Funding

Glucose Signal Transduction Pathways in PlantsR01GM060493 · NIGMS · MASSACHUSETTS GENERAL HOSPITAL · PI SHEEN, JEN · 2000 to 2017
$5.7M
Signaling Mechanisms in Plant Innate ImmunityR01GM070567 · NIGMS · MASSACHUSETTS GENERAL HOSPITAL · PI SHEEN, JEN · 2005 to 2017
$4.2M
NIGMS NIH HHS R01 GM060493NIGMS NIH HHS R01 GM070567NIGMS NIH HHS R01 GM70567
6 · The paper itself

Abstract

Calcium-dependent protein kinases (CDPKs) are multifunctional proteins that combine calcium-binding and signaling capabilities within a single gene product. This unique versatility enables multiple plant biological processes to be controlled, including developmental programs and stress responses. The genome of flowering plants typically encodes around 30 CDPK homologs that cluster in four conserved clades. In this review, we take advantage of the recent availability of genome sequences from green algae and early land plants to examine how well the previously described CDPK family from angiosperms compares to the broader evolutionary states associated with early diverging green plant lineages. Our analysis suggests that the current architecture of the CDPK family was shaped during the colonization of the land by plants, whereas CDPKs from ancestor green algae have continued to evolve independently.

Indexed as

GenomicsCalcium-Calmodulin-Dependent Protein KinasesProtein KinasesViridiplantaeCalcium-Calmodulin-Dependent Protein KinasesProtein Kinasescalcium signalingCDPKsevolutiongreen plant lineages

Identifiers

PMID24342084
PMCPMC3932502
OpenAlexW2019785449

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.