Evidence map›Paper›PMID 24338009›Full record

ArticleThe Journal of biological chemistry2014

The interaction of integrin αIIbβ3 with fibrin occurs through multiple binding sites in the αIIb β-propeller domain.

Nataly P Podolnikova, Sergiy Yakovlev, Valentin P Yakubenko, Xu Wang, Oleg V Gorkun, Tatiana P Ugarova

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 53 citations in OpenAlex.

  1. Review
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  11. Platelets Promote Thromboinflammation in SARS-CoV-2 Pneumonia.Arteriosclerosis, thrombosis, and vascular biology · 2020
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

Nataly P PodolnikovaFrom the Center for Metabolic and Vascular Biology and.
Sergiy Yakovlev
Valentin P Yakubenko
Xu Wang
Oleg V Gorkun
Tatiana P Ugarova
Arizona State University · USCleveland Clinic · USUniversity of Maryland, Baltimore · USUniversity of North Carolina at Chapel Hill · US

Funding

The role of beta 2 integrins in macrophage fusionR01HL063199 · NHLBI · CLEVELAND CLINIC LERNER COM-CWRU · PI Tatiana P Ugarova · 1999 to 2026
$8.6M
Molecular Basis for Nonadhesive Properties of Fibrinogen MatricesR01HL107539 · NHLBI · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI ROS, ROBERT, UGAROVA, TATIANA P · 2011 to 2014
$1.6M
The role of β2 integrins in macrophage retention and egress during inflammationR01DK102020 · NIDDK · EAST TENNESSEE STATE UNIVERSITY · PI YAKUBENKO, VALENTIN P · 2014 to 2017
$1.2M
NHLBI NIH HHS HL107539NHLBI NIH HHS HL63199NHLBI NIH HHS R01 HL063199NHLBI NIH HHS R01 HL107539NIDDK NIH HHS R01 DK102020
6 · The paper itself

Abstract

The currently available antithrombotic agents target the interaction of platelet integrin αIIbβ3 (GPIIb-IIIa) with fibrinogen during platelet aggregation. Platelets also bind fibrin formed early during thrombus growth. It was proposed that inhibition of platelet-fibrin interactions may be a necessary and important property of αIIbβ3 antagonists; however, the mechanisms by which αIIbβ3 binds fibrin are uncertain. We have previously identified the γ370-381 sequence (P3) in the γC domain of fibrinogen as the fibrin-specific binding site for αIIbβ3 involved in platelet adhesion and platelet-mediated fibrin clot retraction. In the present study, we have demonstrated that P3 can bind to several discontinuous segments within the αIIb β-propeller domain of αIIbβ3 enriched with negatively charged and aromatic residues. By screening peptide libraries spanning the sequence of the αIIb β-propeller, several sequences were identified as candidate contact sites for P3. Synthetic peptides duplicating these segments inhibited platelet adhesion and clot retraction but not platelet aggregation, supporting the role of these regions in fibrin recognition. Mutant αIIbβ3 receptors in which residues identified as critical for P3 binding were substituted for homologous residues in the I-less integrin αMβ2 exhibited reduced cell adhesion and clot retraction. These residues are different from those that are involved in the coordination of the fibrinogen γ404-411 sequence and from auxiliary sites implicated in binding of soluble fibrinogen. These results map the binding of fibrin to multiple sites in the αIIb β-propeller and further indicate that recognition specificity of αIIbβ3 for fibrin differs from that for soluble fibrinogen.

Indexed as

Binding SitesBlood PlateletsFemaleFibrinFibrinogenHEK293 CellsHumansIntegrin alpha2Macrophage-1 AntigenMaleMutationPlatelet AdhesivenessPlatelet AggregationPlatelet Glycoprotein GPIIb-IIIa ComplexProtein Structure, TertiaryFibrinFibrinogenIntegrin alpha2ITGA2B protein, humanMacrophage-1 AntigenPlatelet Glycoprotein GPIIb-IIIa ComplexAdhesionClot RetractionFibrinFibrinogenIntegrinPlatelets

Identifiers

PMID24338009
PMCPMC3900980
OpenAlexW1974042040

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.