Evidence map›Paper›PMID 24337800›Full record

ArticlePlant molecular biology2014

A novel chloroplast localized Rab GTPase protein CPRabA5e is involved in stress, development, thylakoid biogenesis and vesicle transport in Arabidopsis.

Sazzad Karim, Mohamed Alezzawi, Christel Garcia-Petit, Katalin Solymosi, Nadir Zaman Khan, Emelie Lindquist, Peter Dahl, Stefan Hohmann, Henrik Aronsson

Abstract read
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In one paragraph

Article in Plant molecular biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 59 citations in OpenAlex.

  1. Article
  2. Review
  3. On the non-oxygenic origins of thylakoids.Communications biology · 2025
    Review
  4. Article
  5. Article
  6. Review
  7. Diversification of Plastid Structure and Function in Land Plants.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Review
  13. Genome-Wide Analysis of theInternational journal of molecular sciences · 2022
    Article
  14. NNature communications · 2022
    Article
  15. Article
  16. Review
  17. Article
  18. A Sec14 domain protein is required for photoautotrophic growth and chloroplast vesicle formation inProceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Sazzad KarimDepartment of Biological and Environmental Sciences, University of Gothenburg, SE-405 30, Gothenburg, Sweden.
Mohamed Alezzawi
Christel Garcia-Petit
Katalin Solymosi
Nadir Zaman Khan
Emelie Lindquist
Peter Dahl
Stefan Hohmann
Henrik Aronsson
University of Gothenburg · SEEötvös Loránd University · HU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A novel Rab GTPase protein in Arabidopsis thaliana, CPRabA5e (CP = chloroplast localized) is located in chloroplasts and has a role in transport. Transient expression of CPRabA5e:EGFP fusion protein in tobacco (Nicotiana tabacum) leaves, and immunoblotting using Arabidopsis showed localization of CPRabA5e in chloroplasts (stroma and thylakoids). Ypt31/32 in the yeast Saccharomyces cerevisiae are involved in regulating vesicle transport, and CPRabA5e a close homolog of Ypt31/32, restores the growth of the ypt31Δ ypt32(ts) mutant at 37 °C in yeast complementation. Knockout mutants of CPRabA5e displayed delayed seed germination and growth arrest during oxidative stress. Ultrastructural studies revealed that after preincubation at 4 °C mutant chloroplasts contained larger plastoglobules, lower grana, and more vesicles close to the envelopes compared to wild type, and vesicle formation being enhanced under oxidative stress. This indicated altered thylakoid development and organization of the mutants. A yeast-two-hybrid screen with CPRabA5e as bait revealed 13 interacting partner proteins, mainly located in thylakoids and plastoglobules. These proteins are known or predicted to be involved in development, stress responses, and photosynthesis related processes, consistent with the stress phenotypes observed. The results observed suggest a role of CPRabA5e in transport to and from thylakoids, similar to cytosolic Rab proteins involved in vesicle transport.

Indexed as

Amino Acid SequenceArabidopsisArabidopsis ProteinsBiological TransportChloroplastsCold TemperatureMolecular Sequence DataOxidative StressPhenotypePhylogenyPlant LeavesProtein Structure, Tertiaryrab GTP-Binding ProteinsRecombinant Fusion ProteinsSaccharomyces cerevisiaeSeedlingsArabidopsis ProteinsRabA5e protein, Arabidopsisrab GTP-Binding ProteinsRecombinant Fusion Proteins

Identifiers

PMID24337800
OpenAlexW2036046129

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.