Evidence map›Paper›PMID 24337451›Full record

ArticleJournal of comparative physiology. B, Biochemical, systemic, and environmental physiology2014

Patterns of ubiquitylation and SUMOylation associated with exposure to anoxia in embryos of the annual killifish Austrofundulus limnaeus.

Camie L Meller, Robert Meller, Roger P Simons, Jason E Podrabsky

Open access · greenAbstract read
In one paragraph

Article in Journal of comparative physiology. B, Biochemical, systemic, and environmental physiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.4field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Camie L MellerDepartment of Biology, Portland State University, P.O. Box 751, Portland, OR, 97207, USA.
Robert Meller
Roger P Simons
Jason E Podrabsky
Morehouse School of Medicine · USPortland State University · US

Funding

Morehouse School of Medicine Center of Excellence Research Endowment ProgramS21MD000101 · NIMHD · MOREHOUSE SCHOOL OF MEDICINE · PI MONTGOMERY-RICE, VALERIE C. · 2001 to 2015
$74.3M
MOLECULAR MECHANISMS OF SEIZURE INDUCED BRAIN INJURYR01NS039016 · NINDS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI SIMON, ROGER PANCOAST · 1999 to 2009
$2.6M
Rapid ischemic tolerance: Synaptic re-organization and reduced excitotoxicityR01NS059588 · NINDS · MOREHOUSE SCHOOL OF MEDICINE · PI MELLER, ROBERT · 2008 to 2012
$1.6M
The Role of phosphoenolpyruvate carboxykinase and reactive oxygen species in theR01HL095454 · NHLBI · PORTLAND STATE UNIVERSITY · PI PODRABSKY, JASON EARL · 2010 to 2013
$1.4M
NHLBI NIH HHS R01 HL095454NIMHD NIH HHS S21 MD000101NINDS NIH HHS R01 NS039016NINDS NIH HHS R01 NS059588NINDS NIH HHS R01 NS39016NINDS NIH HHS R01 NS59588
6 · The paper itself

Abstract

Embryos of the annual killifish Austrofundulus limnaeus acquire extreme tolerance to anoxia during embryonic development. These embryos can survive environmental and cellular conditions that would likely result in death in the majority of vertebrate cells, despite experiencing a massive loss of ATP. It is highly likely that the initial response to anoxia must quickly alter cellular physiology to reprogram cell signaling and metabolic pathways to support anaerobiosis. Covalent protein modifications are a mechanism that can quickly act to effect large-scale changes in protein structure and function and have been suggested by others to play a key role in mammalian ischemia tolerance. Using Western blot analysis, we explored patterns of protein ubiquitylation and SUMOylation in embryos of A. limnaeus exposed to anoxia and anoxic preconditioning. Surprisingly, we report stage-specific protein ubiquitylation patterns that suggest different mechanisms for altering protein turnover in dormant and actively developing embryos that both survive long-term anoxia. Anoxic preconditioning does not appear to alter levels of ubiquitin conjugates in a unique manner. Global SUMOylation of proteins does not change in response to anoxia, but there are stage-specific changes in SUMOylation of specific protein bands. Contrary to other systems, global changes in protein SUMOylation may not be required to support long-term tolerance to anoxia in embryos of A. limnaeus. These data lead us to conclude that embryos of A. limnaeus respond to anoxia in a unique manner compared to other vertebrate models of anoxia tolerance and may provide novel mechanisms for engineering vertebrate tissues to survive long-term anoxia.

Indexed as

AnimalsEmbryo, NonmammalianFish ProteinsHypoxiaKillifishesSmall Ubiquitin-Related Modifier ProteinsSUMO-1 ProteinSumoylationUbiquitinationFish ProteinsSmall Ubiquitin-Related Modifier ProteinsSUMO-1 Protein

Identifiers

PMID24337451
PMCPMC3957487
OpenAlexW2050211550

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.