Evidence map›Paper›PMID 24336862›Full record

ArticleThe Journal of heredity

The Global Invertebrate Genomics Alliance (GIGA): developing community resources to study diverse invertebrate genomes.

GIGA Community of Scientists, Heather Bracken-Grissom, Allen G Collins, Timothy Collins, Keith Crandall, Daniel Distel, Casey Dunn, Gonzalo Giribet, Steven Haddock, Nancy Knowlton and 38 more

Abstract read
In one paragraph

Article in The Journal of heredity. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
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  11. Threatened Species Initiative: Empowering conservation action using genomic resources.Proceedings of the National Academy of Sciences of the United States of America · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

48 authors.

GIGA Community of Scientists
Heather Bracken-Grissom
Allen G Collins
Timothy Collins
Keith Crandall
Daniel Distel
Casey Dunn
Gonzalo Giribet
Steven Haddock
Nancy Knowlton
Mark Martindale
Mónica Medina
Charles Messing
Stephen J O'Brien
Gustav Paulay
Nicolas Putnam
Timothy Ravasi
Greg W Rouse
Joseph F Ryan
Anja Schulze
Gert Wörheide
Maja Adamska
Xavier Bailly
Jesse Breinholt
William E Browne
M Christina Diaz
Nathaniel Evans
Jean-François Flot
Nicole Fogarty
Matthew Johnston
Bishoy Kamel
Akito Y Kawahara
Tammy Laberge
Dennis Lavrov
François Michonneau
Leonid L Moroz
Todd Oakley
Karen Osborne
Shirley A Pomponi
Adelaide Rhodes
Scott R Santos
Nori Satoh
Robert W Thacker
Yves Van de Peer
Christian R Voolstra
David Mark Welch
Judith Winston
Xin Zhou

Funding

Genomic Approaches to Deciphering Memory CircuitsR01MH097062 · NIMH · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI JU, JINGYUE, KANDEL, ERIC R · 2012 to 2016
$2.0M
NIMH NIH HHS R01 MH097062
6 · The paper itself

Abstract

Over 95% of all metazoan (animal) species comprise the "invertebrates," but very few genomes from these organisms have been sequenced. We have, therefore, formed a "Global Invertebrate Genomics Alliance" (GIGA). Our intent is to build a collaborative network of diverse scientists to tackle major challenges (e.g., species selection, sample collection and storage, sequence assembly, annotation, analytical tools) associated with genome/transcriptome sequencing across a large taxonomic spectrum. We aim to promote standards that will facilitate comparative approaches to invertebrate genomics and collaborations across the international scientific community. Candidate study taxa include species from Porifera, Ctenophora, Cnidaria, Placozoa, Mollusca, Arthropoda, Echinodermata, Annelida, Bryozoa, and Platyhelminthes, among others. GIGA will target 7000 noninsect/nonnematode species, with an emphasis on marine taxa because of the unrivaled phyletic diversity in the oceans. Priorities for selecting invertebrates for sequencing will include, but are not restricted to, their phylogenetic placement; relevance to organismal, ecological, and conservation research; and their importance to fisheries and human health. We highlight benefits of sequencing both whole genomes (DNA) and transcriptomes and also suggest policies for genomic-level data access and sharing based on transparency and inclusiveness. The GIGA Web site (http://giga.nova.edu) has been launched to facilitate this collaborative venture.

Indexed as

GenomeAnimalsBiological EvolutionGenomicsInvertebratesOrganizationsPhylogenybiodiversitycomparative genomicsconsortiumevolutionGIGAinvertebratesmetazoa

Identifiers

PMID24336862
PMCPMC4072906

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.