Evidence map›Paper›PMID 24336796›Full record

ArticleeLife2013

Rasgrp1 mutation increases naive T-cell CD44 expression and drives mTOR-dependent accumulation of Helios⁺ T cells and autoantibodies.

Stephen R Daley, Kristen M Coakley, Daniel Y Hu, Katrina L Randall, Craig N Jenne, Andre Limnander, Darienne R Myers, Noelle K Polakos, Anselm Enders, Carla Roots and 13 more

Open access · goldAbstract read
In one paragraph

Article in eLife, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 65 citations in OpenAlex.

  1. Article
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  4. Review
  5. Article
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  11. Ras GEF Mouse Models for the Analysis of Ras Biology and Signaling.Methods in molecular biology (Clifton, N.J.) · 2021
    Article
  12. Regulation of the Small GTPase Ras and Its Relevance to Human Disease.Methods in molecular biology (Clifton, N.J.) · 2021
    Review
  13. Metabolic Choice Tunes Foxp3+ Regulatory T Cell Function.Advances in experimental medicine and biology · 2021
    Article
  14. Article
  15. Article
  16. Review
  17. Review
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  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 5 institutions in 3 countries.

Stephen R DaleyDepartment of Immunology, John Curtin School of Medical Research, The Australian National University, Canberra, Australia.
Kristen M Coakley
Daniel Y Hu
Katrina L Randall
Craig N Jenne
Andre Limnander
Darienne R Myers
Noelle K Polakos
Anselm Enders
Carla Roots
Bhavani Balakishnan
Lisa A Miosge
Geoff Sjollema
Edward M Bertram
Matthew A Field
Yunli Shao
T Daniel Andrews
Belinda Whittle
S Whitney Barnes
John R Walker
Jason G Cyster
Christopher C Goodnow
Jeroen P Roose
Australian National University · AUUniversity of California, San Francisco · USGenomics Institute of the Novartis Research Foundation · USCanberra Hospital · AUUniversity of Calgary · CA

Funding

Systems Biology CoreU19AI100627 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI ULEVITCH, RICHARD J · 2012 to 2021
$49.1M
Systems Approach to Innate Immunity-Inflammation-SepsisU54AI054523 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI ULEVITCH, RICHARD J · 2002 to 2006
$28.0M
MOLECULAR AND CELLULAR IMMUNOLOGYT32AI007334 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CYSTER, JASON G · 1988 to 2023
$11.0M
Genes for Tolerance and Immunity ConsortiumR01AI052127 · NIAID · AUSTRALIAN NATIONAL UNIVERSITY · PI GOODNOW, CHRISTOPHER CARL · 2002 to 2006
$6.3M
Cellular and Genetic Analysis of Lymphocyte EgressR01AI074847 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CYSTER, JASON G · 2007 to 2016
$3.8M
The role of tonic signal-input in stable gene profilesK01CA113367 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI ROOSE, JEROEN · 2006 to 2010
$806k
Mechanistic Studies of Ras-MAPK Signals: Specialzed Cues for the T cell Lineage?R56AI095292 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI ROOSE, JEROEN · 2011 to 2011
$258k
Modulation of B cell tolerance checkpoints by distinct Ras/Erk PathwaysR03AR062783 · NIAMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI LIMNANDER, ANDRE · 2013 to 2014
$139k
Howard Hughes Medical InstituteNCI NIH HHS K01 CA113367NIAID NIH HHS R01 AI052127NIAID NIH HHS R01 AI074847NIAID NIH HHS R01 AI52127NIAID NIH HHS R01-AI74847NIAID NIH HHS R56 AI095292NIAID NIH HHS T32 AI007334NIAID NIH HHS U19 AI100627NIAID NIH HHS U54 AI054523NIAMS NIH HHS 1R03AR062783-01A1NIAMS NIH HHS R03 AR062783Wellcome Trust
6 · The paper itself

Abstract

Missense variants are a major source of human genetic variation. Here we analyze a new mouse missense variant, Rasgrp1(Anaef), with an ENU-mutated EF hand in the Rasgrp1 Ras guanine nucleotide exchange factor. Rasgrp1(Anaef) mice exhibit anti-nuclear autoantibodies and gradually accumulate a CD44(hi) Helios(+) PD-1(+) CD4(+) T cell population that is dependent on B cells. Despite reduced Rasgrp1-Ras-ERK activation in vitro, thymocyte selection in Rasgrp1(Anaef) is mostly normal in vivo, although CD44 is overexpressed on naïve thymocytes and T cells in a T-cell-autonomous manner. We identify CD44 expression as a sensitive reporter of tonic mTOR-S6 kinase signaling through a novel mouse strain, chino, with a reduction-of-function mutation in Mtor. Elevated tonic mTOR-S6 signaling occurs in Rasgrp1(Anaef) naïve CD4(+) T cells. CD44 expression, CD4(+) T cell subset ratios and serum autoantibodies all returned to normal in Rasgrp1(Anaef)Mtor(chino) double-mutant mice, demonstrating that increased mTOR activity is essential for the Rasgrp1(Anaef) T cell dysregulation. DOI: http://dx.doi.org/10.7554/eLife.01020.001.

Indexed as

MutationAnimalsAutoantibodiesEF Hand MotifsGuanine Nucleotide Exchange FactorsHyaluronan ReceptorsMiceT-LymphocytesTOR Serine-Threonine KinasesAutoantibodiesCd44 protein, mouseGuanine Nucleotide Exchange FactorsHyaluronan ReceptorsmTOR protein, mouseRasgrp1 protein, mouseTOR Serine-Threonine KinasesautoimmunityENU mutantmTORRasGRP1signalingT lymphoctes

Identifiers

PMID24336796
PMCPMC3858598
OpenAlexW2144825341

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.