Evidence map›Paper›PMID 24336499›Full record

ArticleScientific reports2013

Identification of novel modifiers of Aβ toxicity by transcriptomic analysis in the fruitfly.

G Favrin, D M Bean, E Bilsland, H Boyer, B E Fischer, S Russell, D C Crowther, H A Baylis, S G Oliver, M E Giannakou

Abstract read
In one paragraph

Article in Scientific reports, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Review
  3. Genetic Dissection of Alzheimer's Disease UsingInternational journal of molecular sciences · 2020
    Review
  4. Article
  5. Article
  6. Review
  7. Review
  8. Article
  9. Article
  10. Review
  11. Review
  12. Cross-organism analysis using InterMine.Genesis (New York, N.Y. : 2000) · 2015
    Review
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

G Favrin1] Cambridge Systems Biology Centre, University of Cambridge, Cambridge, CB2 1GA, UK [2] Department of Biochemistry, University of Cambridge, Cambridge, CB2 1GA, UK [3].
D M Bean1] Cambridge Systems Biology Centre, University of Cambridge, Cambridge, CB2 1GA, UK [2] Department of Biochemistry, University of Cambridge, Cambridge, CB2 1GA, UK [3].
E Bilsland1] Cambridge Systems Biology Centre, University of Cambridge, Cambridge, CB2 1GA, UK [2] Department of Biochemistry, University of Cambridge, Cambridge, CB2 1GA, UK.
H BoyerDepartment of Zoology, University of Cambridge, Cambridge, CB2 3EJ, UK.
B E Fischer1] Cambridge Systems Biology Centre, University of Cambridge, Cambridge, CB2 1GA, UK [2] Department of Genetics, University of Cambridge, Cambridge, CB2 3EH, UK.
S Russell1] Cambridge Systems Biology Centre, University of Cambridge, Cambridge, CB2 1GA, UK [2] Department of Genetics, University of Cambridge, Cambridge, CB2 3EH, UK.
D C CrowtherDepartment of Genetics, University of Cambridge, Cambridge, CB2 3EH, UK.
H A BaylisDepartment of Zoology, University of Cambridge, Cambridge, CB2 3EJ, UK.
S G Oliver1] Cambridge Systems Biology Centre, University of Cambridge, Cambridge, CB2 1GA, UK [2] Department of Biochemistry, University of Cambridge, Cambridge, CB2 1GA, UK.
M E GiannakouDepartment of Zoology, University of Cambridge, Cambridge, CB2 3EJ, UK.

Funding

Medical Research Council G0700990Medical Research Council MC_G1000734Wellcome Trust 082604/2/07/ZWellcome Trust 089703Wellcome Trust 089703/Z/09/Z
6 · The paper itself

Abstract

The strongest risk factor for developing Alzheimer's Disease (AD) is age. Here, we study the relationship between ageing and AD using a systems biology approach that employs a Drosophila (fruitfly) model of AD in which the flies overexpress the human Aβ42 peptide. We identified 712 genes that are differentially expressed between control and Aβ-expressing flies. We further divided these genes according to how they change over the animal's lifetime and discovered that the AD-related gene expression signature is age-independent. We have identified a number of differentially expressed pathways that are likely to play an important role in the disease, including oxidative stress and innate immunity. In particular, we uncovered two new modifiers of the Aβ phenotype, namely Sod3 and PGRP-SC1b.

Indexed as

Gene Expression ProfilingTranscriptomeAgingAmyloid beta-PeptidesAnimalsCluster AnalysisComputational BiologyDrosophilaFemaleGene Expression RegulationImmunity, InnateMaleMolecular ChaperonesOxidative StressPhenotypeRNA InterferenceAmyloid beta-PeptidesMolecular Chaperones

Identifiers

PMID24336499
PMCPMC3863820

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.