Evidence map›Paper›PMID 24336107›Full record

ArticleNature communications2013

Dampened regulates the activating potency of Bicoid and the embryonic patterning outcome in Drosophila.

Junbo Liu, Jun Ma

Abstract read
In one paragraph

Article in Nature communications, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Junbo LiuDivision of Biomedical Informatics, Cincinnati Children's Research Foundation, 3333 Burnet Avenue, Cincinnati, Ohio 45229, USA.
Jun Ma1] Division of Biomedical Informatics, Cincinnati Children's Research Foundation, 3333 Burnet Avenue, Cincinnati, Ohio 45229, USA [2] Division of Developmental Biology, Cincinnati Children's Research Foundation, 3333 Burnet Avenue, Cincinnati, Ohio, USA.

Funding

Regulation and Scaling of a Morphogen GradientR01GM101373 · NIGMS · CINCINNATI CHILDRENS HOSP MED CTR · PI MA, JUN · 2012 to 2015
$1.2M
NIGMS NIH HHS R01 GM101373NIGMS NIH HHS R01GM101373
6 · The paper itself

Abstract

The Drosophila morphogen gradient of Bicoid (Bcd) initiates anterior-posterior (AP) patterning; however, it is poorly understood how its ability to activate a target gene may have an impact on this process. Here we report an F-box protein, Dampened (Dmpd) as a nuclear cofactor of Bcd that can enhance its activating potency. We establish a quantitative platform to specifically investigate two parameters of a Bcd target gene response, expression amplitude and boundary position. We show that embryos lacking Dmpd have a reduced amplitude of Bcd-activated hunchback (hb) expression at a critical time of development. This is because of a reduced Bcd-dependent transcribing probability. This defect is faithfully propagated further downstream of the AP-patterning network to alter the spatial characteristics of even-skipped (eve) stripes. Thus, unlike another Bcd-interacting F-box protein Fate-shifted (Fsd), which controls AP patterning through regulating the Bcd gradient profile, Dmpd achieves its patterning role through regulating the activating potency of Bcd.

Indexed as

Body PatterningGene Expression Regulation, DevelopmentalAllelesAnimalsDrosophila melanogasterDrosophila ProteinsF-Box ProteinsFemaleGenes, ReporterHEK293 CellsHomeodomain ProteinsHumansMaleMutationPlasmidsRecombinant Fusion Proteinsbcd protein, DrosophilaDmpd protein, DrosophilaDrosophila ProteinsF-Box Proteinsfsd protein, DrosophilaHomeodomain ProteinsRecombinant Fusion ProteinsTrans-Activators

Identifiers

PMID24336107
PMCPMC3902774

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.