Evidence map›Paper›PMID 24335300›Full record

ArticleJournal of virology2014

Unification of the globally distributed spindle-shaped viruses of the Archaea.

Mart Krupovic, Emmanuelle R J Quemin, Dennis H Bamford, Patrick Forterre, David Prangishvili

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
9.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 93 citations in OpenAlex.

  1. Article
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  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Structural insights into a spindle-shaped archaeal virus with a sevenfold symmetrical tail.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Viruses in astrobiology.Frontiers in microbiology · 2022
    Review
  16. ICTV Virus Taxonomy Profile:The Journal of general virology · 2021
    Article
  17. Article
  18. The LUCA and its complex virome.Nature reviews. Microbiology · 2020
    Review
  19. Article
  20. Pervasive Suicidal Integrases in Deep-Sea Archaea.Molecular biology and evolution · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Mart KrupovicInstitut Pasteur, Unité Biologie Moléculaire du Gène chez les Extrêmophiles, Département de Microbiologie, Paris, France.
Emmanuelle R J Quemin
Dennis H Bamford
Patrick Forterre
David Prangishvili
Institut Pasteur · FRBiology of Extremophiles Laboratory · FRUniversity of Helsinki · FI

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Viruses with spindle-shaped virions are abundant in diverse environments. Over the years, such viruses have been isolated from a wide range of archaeal hosts. Evolutionary relationships between them remained enigmatic, however. Here, using structural proteins as markers, we define familial ties among these "dark horses" of the virosphere and segregate all spindle-shaped viruses into two distinct evolutionary lineages, corresponding to Bicaudaviridae and Fuselloviridae. Our results illuminate the utility of structure-based virus classification and bring additional order to the virosphere.

Indexed as

Models, MolecularPhylogenyArchaeaArchaeal VirusesBase SequenceChromosome MappingDNA VirusesEvolution, MolecularFuselloviridaeGenetic MarkersMicroscopy, ElectronMolecular Sequence DataSequence AlignmentSequence Analysis, DNAViral Structural ProteinsGenetic MarkersViral Structural Proteins

Identifiers

PMID24335300
PMCPMC3911535
OpenAlexW2015076133

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.