Evidence map›Paper›PMID 24334705›Full record

ArticleFASEB journal : official publication of the Federation of American Societies for Experimental Biology2014

Hairless is a histone H3K9 demethylase.

Liang Liu, Hyunmi Kim, Alex Casta, Yuki Kobayashi, Lawrence S Shapiro, Angela M Christiano

Abstract read
In one paragraph

Article in FASEB journal : official publication of the Federation of American Societies for Experimental Biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 44 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Novel rhino-like SHJHZoological research · 2021
    Article
  7. Hairless regulates heterochromatin maintenance and muscle stem cell function as a histone demethylase antagonist.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  8. Review
  9. Human Oxygenase Variants Employing a Single Protein FeAngewandte Chemie (International ed. in English) · 2021
    Article
  10. Human Oxygenase Variants Employing a Single Protein FeAngewandte Chemie (Weinheim an der Bergstrasse, Germany) · 2021
    Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Liang Liu2Department of Dermatology, Columbia University, College of Physicians and Surgeons, Russ Berrie Medical Science Pavilion, 1150 St. Nicholas Ave., Rm. 307, New York, NY 10032, USA. amc65@columbia.edu.
Hyunmi Kim
Alex Casta
Yuki Kobayashi
Lawrence S Shapiro
Angela M Christiano
Columbia University · US

Funding

True Metal fac coreP30ES009089 · NIEHS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI MATTHEW S PERZANOWSKI · 1998 to 2026
$44.7M
Understanding the Biology of Chronic Ulcers: Histological and Molecular Basis...P30AR044535 · NIAMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI BICKERS, DAVID RINSEY · 1997 to 2015
$6.9M
Functional Analysis of the Hairless ProteinR01AR047338 · NIAMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI CHRISTIANO, ANGELA M · 2001 to 2012
$3.4M
GENETIC MECHANISMS IN SKIN DISEASEST32AR007605 · NIAMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI BICKERS, DAVID RINSEY · 1997 to 2010
$1.2M
NIAMS NIH HHS P30 AR044535NIAMS NIH HHS P30AR44535NIAMS NIH HHS R01 AR047338NIAMS NIH HHS R01AR47338NIAMS NIH HHS T32 AR007605NIAMS NIH HHS T32AR007605NIEHS NIH HHS P30 ES009089
6 · The paper itself

Abstract

The hairless (HR) protein contains a Jumonji C (JmjC) domain that is conserved among a family of proteins with histone demethylase (HDM) activity. To test whether HR possesses HDM activity, we performed a series of in vitro demethylation assays, which demonstrated that HR can demethylate monomethylated or dimethylated histone H3 lysine 9 (H3K9me1 or me2). Moreover, ectopic expression of wild-type HR, but not JmjC-mutant HR, led to pronounced demethylation of H3K9 in cultured human HeLa cells. We also show that two missense mutations in HR, which we and others described in patients with atrichia with papular lesions, abolished the demethylase activity of HR, demonstrating the role of HR demethylase activity in human disease. By ChIP-Seq analysis, we identified multiple new HR target genes, many of which play important roles in epidermal development, neural function, and transcriptional regulation, consistent with the predicted biological functions of HR. Our findings demonstrate for the first time that HR is a H3K9 demethylase that regulates epidermal homeostasis via direct control of its target genes.

Indexed as

Basic Helix-Loop-Helix ProteinsBinding SitesBlotting, WesternCaspase 14Cells, CulturedChromatin ImmunoprecipitationGene Expression RegulationHEK293 CellsHeLa CellsHistone DemethylasesHistonesHumansJumonji Domain-Containing Histone DemethylasesLysineMethylationModels, MolecularBasic Helix-Loop-Helix ProteinsCaspase 14Histone DemethylasesHistonesHR protein, humanJumonji Domain-Containing Histone DemethylasesLysineMXI1 protein, humanTranscription FactorsTumor Suppressor ProteinsChIP-Seqepigenetics

Identifiers

PMID24334705
PMCPMC3963012
OpenAlexW2108753275

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.