Evidence map›Paper›PMID 24334609›Full record

ArticleHuman molecular genetics2014

CLYBL is a polymorphic human enzyme with malate synthase and β-methylmalate synthase activity.

Laura Strittmatter, Yang Li, Nathan J Nakatsuka, Sarah E Calvo, Zenon Grabarek, Vamsi K Mootha

Open access · bronzeAbstract read
In one paragraph

Article in Human molecular genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
0.6field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 40 citations in OpenAlex.

  1. Humanized extracellular vesicles for efficient RNA delivery.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  2. Review
  3. Review
  4. Humanized Extracellular Vesicles for Efficient RNA Delivery.bioRxiv : the preprint server for biology · 2025
    Article
  5. CLYBL averts vitamin BNature chemical biology · 2025
    Article
  6. Article
  7. Article
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  10. Thioesterase enzyme families: Functions, structures, and mechanisms.Protein science : a publication of the Protein Society · 2022
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. CitE Enzymes Are Essential forFrontiers in cellular and infection microbiology · 2018
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 5 institutions in 1 country.

Laura StrittmatterDepartment of Molecular Biology, Howard Hughes Medical Institute, Massachusetts General Hospital, Boston, MA 02114, USA.
Yang Li
Nathan J Nakatsuka
Sarah E Calvo
Zenon Grabarek
Vamsi K Mootha
Howard Hughes Medical Institute · USCenter for Systems Biology · USHarvard University · USMassachusetts General Hospital · USMassachusetts Institute of Technology · US

Funding

Medical Scientist Training ProgramT32GM007753 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI WALENSKY, LOREN DAVID · 1985 to 2021
$50.0M
Metabolic Profiling of OXPHOS DysfunctionR01DK081457 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI MOOTHA, VAMSI KRISHNA · 2008 to 2012
$2.2M
Human Mitochondrial Disease: From Novel Gene Variants to Causality and FunctionR01GM097136 · NIGMS · MASSACHUSETTS GENERAL HOSPITAL · PI MOOTHA, VAMSI KRISHNA · 2011 to 2014
$2.0M
NIDDK NIH HHS R01 DK081457NIGMS NIH HHS 1R01GM097136NIGMS NIH HHS R01 GM097136NIGMS NIH HHS T32 GM007753NIGMS NIH HHS T32GM007753
6 · The paper itself

Abstract

CLYBL is a human mitochondrial enzyme of unknown function that is found in multiple eukaryotic taxa and conserved to bacteria. The protein is expressed in the mitochondria of all mammalian organs, with highest expression in brown fat and kidney. Approximately 5% of all humans harbor a premature stop polymorphism in CLYBL that has been associated with reduced levels of circulating vitamin B12. Using comparative genomics, we now show that CLYBL is strongly co-expressed with and co-evolved specifically with other components of the mitochondrial B12 pathway. We confirm that the premature stop polymorphism in CLYBL leads to a loss of protein expression. To elucidate the molecular function of CLYBL, we used comparative operon analysis, structural modeling and enzyme kinetics. We report that CLYBL encodes a malate/β-methylmalate synthase, converting glyoxylate and acetyl-CoA to malate, or glyoxylate and propionyl-CoA to β-methylmalate. Malate synthases are best known for their established role in the glyoxylate shunt of plants and lower organisms and are traditionally described as not occurring in humans. The broader role of a malate/β-methylmalate synthase in human physiology and its mechanistic link to vitamin B12 metabolism remain unknown.

Indexed as

Acetyl Coenzyme AAcyl Coenzyme AEnzymesGlyoxylatesHumansMalatesMalate SynthaseOxo-Acid-LyasesSubstrate SpecificityAcetyl Coenzyme AAcyl Coenzyme Abeta-methylmalatebeta-methylmalyl-coenzyme A lyaseEnzymesGlyoxylatesglyoxylic acidMalatesMalate Synthasemalic acidOxo-Acid-Lyasespropionyl-coenzyme A

Identifiers

PMID24334609
PMCPMC3976331
OpenAlexW2166765742

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.