Evidence map›Paper›PMID 24330414›Full record

ArticleMolecular microbiology2014

Beyond catalysis: vitamin B12 as a cofactor in gene regulation.

Gabriele Klug

Open access · bronzeAbstract readComment
PubMed Publisher
In one paragraph

Article in Molecular microbiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 30 citations in OpenAlex.

  1. Review
  2. Article
  3. Insights into the Lysine Acetylome of the HaloarchaeonAntioxidants (Basel, Switzerland) · 2023
    Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Oral vitamin BGut microbes · 2019
    Article
  14. Article
  15. Article
  16. Elucidation of roles for vitamin BProceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  17. Article
  18. Review
  19. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

1 author at 1 institution in 1 country.

Gabriele KlugInstitute of Microbiology and Molecular Biology, IFZ, Justus Liebig University of Giessen, Heinrich-Buff-Ring 26-32, 35392, Giessen, Germany.
University of Giessen · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Vitamin B12 is well known as an enzyme cofactor in the catalysis of many important biological reactions, and the role of B12 in regulation of bacterial gene expression as a ligand of riboswitches is well established. Only recently evidence has emerged that B12 can also affect bacterial gene expression by acting as a cofactor of regulatory proteins. In 2011 a role of B12 as a cofactor of the transcriptional repressor of carotenogenesis, CarH, in Myxococcus xanthus was reported. B12 is required for light-dependent DNA binding by CarH, which can therefore be considered to be a new type of photoreceptor. Cheng et al. (2014) report the identification of B12 as a cofactor of the AerR protein in Rhodobacter capsulatus. AerR acts as an antirepressor of the CrtJ protein, which represses photosynthesis genes when binding to its target promoters. As in Myxococcus B12 may have the role of a chromophore in photoreception, but it is suggested that a main function of AerR is the sensing of B12. The co-regulation of the pathways is beneficial because the syntheses of B12 , haem and bacteriochlorophylls share common precursors and the accumulation of the free molecules is toxic.

Indexed as

Gene ExpressionBacterial ProteinsBacteriochlorophyllsDNA-Binding ProteinsGene Expression Regulation, BacterialRepressor ProteinsRhodobacter capsulatusTranscription FactorsVitamin B 12Bacterial ProteinsBacteriochlorophyllsCrtJ protein, RhodobacterDNA-Binding ProteinsRepressor ProteinsTranscription FactorsVitamin B 12

Identifiers

PMID24330414
OpenAlexW2098556143

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.