Evidence map›Paper›PMID 24329562›Full record

ArticleMolecular microbiology2014

Vitamin B12 regulates photosystem gene expression via the CrtJ antirepressor AerR in Rhodobacter capsulatus.

Zhuo Cheng, Keran Li, Loubna A Hammad, Jonathan A Karty, Carl E Bauer

Open access · bronzeAbstract read
In one paragraph

Article in Molecular microbiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 56 citations in OpenAlex.

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  12. Engineering a vitamin BBMC biotechnology · 2018
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  14. A New Facet of Vitamin BAnnual review of biochemistry · 2017
    Review
  15. Article
  16. The Vitamin BmBio · 2017
    Article
  17. Microbial production of vitamin BMicrobial cell factories · 2017
    Review
  18. Article
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  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Zhuo ChengDepartment of Molecular and Cellular Biochemistry, Indiana University, Bloomington, IN, 47405, USA.
Keran Li
Loubna A Hammad
Jonathan A Karty
Carl E Bauer
Indiana University Bloomington · US

Funding

Prokaryotic gene regulation by light and oxygenR37GM040941 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI BAUER, CARL EUGENE · 2006 to 2016
$5.4M
NIGMS NIH HHS R37 GM040941
6 · The paper itself

Abstract

The tetrapyrroles haem, bacteriochlorophyll and cobalamin (B12 ) exhibit a complex interrelationship regarding their synthesis. In this study, we demonstrate that AerR functions as an antirepressor of the tetrapyrrole regulator CrtJ. We show that purified AerR contains B12 that is bound to a conserved histidine (His145) in AerR. The interaction of AerR to CrtJ was further demonstrated in vitro by pull down experiments using AerR as bait and quantified using microscale thermophoresis. DNase I DNA footprint assays show that AerR containing B12 inhibits CrtJ binding to the bchC promoter. We further show that bchC expression is greatly repressed in a B12 auxotroph of Rhodobacter capsulatus and that B12 regulation of gene expression is mediated by AerR's ability to function as an antirepressor of CrtJ. This study thus provides a mechanism for how the essential tetrapyrrole, cobalamin controls the synthesis of bacteriochlorophyll, an essential component of the photosystem.

Indexed as

Gene ExpressionBacterial ProteinsBacteriochlorophyllsCentrifugationDNA-Binding ProteinsDNA FootprintingGene Expression Regulation, BacterialProtein BindingProtein Interaction MappingRepressor ProteinsRhodobacter capsulatusTranscription FactorsVitamin B 12Bacterial ProteinsBacteriochlorophyllsCrtJ protein, RhodobacterDNA-Binding ProteinsRepressor ProteinsTranscription FactorsVitamin B 12

Identifiers

PMID24329562
PMCPMC3946051
OpenAlexW2170614560

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.