Evidence map›Paper›PMID 24328859›Full record

ArticleThe Biochemical journal2014

Hypoxia-inducible factors regulate human and rat cystathionine β-synthase gene expression.

Naoharu Takano, Ying-Jie Peng, Ganesh K Kumar, Weibo Luo, Hongxia Hu, Larissa A Shimoda, Makoto Suematsu, Nanduri R Prabhakar, Gregg L Semenza

Abstract read
In one paragraph

Article in The Biochemical journal, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 38 citations in OpenAlex.

  1. Adaptation of OXPHOS biogenesis to cellular requirements.Protein science : a publication of the Protein Society · 2026
    Review
  2. Article
  3. Article
  4. Review
  5. Review
  6. Cysteine as a Multifaceted Player in Kidney, theMolecules (Basel, Switzerland) · 2022
    Review
  7. The Antioxidant Role of One-Carbon Metabolism on Stroke.Antioxidants (Basel, Switzerland) · 2020
    Review
  8. Mistimed HBiomedical reports · 2020
    Article
  9. Review
  10. Hydrogen Sulfide Metabolism and Signaling in the Tumor Microenvironment.Advances in experimental medicine and biology · 2020
    Review
  11. Article
  12. Review
  13. CystathionineBioMed research international · 2018
    Review
  14. Article
  15. Review
  16. Article
  17. Review
  18. Article
  19. Review
  20. Cardiac H2S Generation Is Reduced in Ageing Diabetic Mice.Oxidative medicine and cellular longevity · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Naoharu Takano
Ying-Jie Peng§Institute for Integrative Physiology and Center for Systems Biology of O2 Sensing, University of Chicago, Chicago, IL 60637, U.S.A.
Ganesh K Kumar§Institute for Integrative Physiology and Center for Systems Biology of O2 Sensing, University of Chicago, Chicago, IL 60637, U.S.A.
Weibo Luo
Hongxia Hu
Larissa A Shimoda
Makoto Suematsu‡Department of Biochemistry, School of Medicine, Keio University, Tokyo 160-8582, Japan.
Nanduri R Prabhakar§Institute for Integrative Physiology and Center for Systems Biology of O2 Sensing, University of Chicago, Chicago, IL 60637, U.S.A.
Gregg L Semenza
Keio University · JP

Funding

Integrative Consequences of HypoxiaP01HL090554 · NHLBI · UNIVERSITY OF CHICAGO · PI PRABHAKAR, NANDURI R · 2008 to 2017
$21.4M
Predoctoral Training Program in Human GeneticsT32GM007814 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI VALLE, DAVID · 1985 to 2021
$10.6M
The role of JMJD2C in HIF-1 activation and breast cancer progressionR00CA168746 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI LUO, WEIBO · 2015 to 2017
$747k
The role of JMJD2C in HIF-1 activation and breast cancer progressionK99CA168746 · NCI · JOHNS HOPKINS UNIVERSITY · PI LUO, WEIBO · 2013 to 2014
$241k
NCI NIH HHS K99 CA168746NCI NIH HHS R00 CA168746NHLBI NIH HHS P01 HL090554NIGMS NIH HHS T32 GM007814
6 · The paper itself

Abstract

Increased catalytic activity of CBS (cystathionine β-synthase) was recently shown to mediate vasodilation of the cerebral microcirculation, which is initiated within minutes of the onset of acute hypoxia. To test whether chronic hypoxia was a stimulus for increased CBS expression, U87-MG human glioblastoma and PC12 rat phaeochromocytoma cells were exposed to 1% or 20% O2 for 24-72 h. CBS mRNA and protein expression were increased in hypoxic cells. Hypoxic induction of CBS expression was abrogated in cells transfected with vector encoding shRNA targeting HIF (hypoxia-inducible factor) 1α or 2α. Exposure of rats to hypobaric hypoxia (0.35 atm; 1 atm=101.325 kPa) for 3 days induced increased CBS mRNA, protein and catalytic activity in the cerebral cortex and cerebellum, which was blocked by administration of the HIF inhibitor digoxin. HIF-binding sites, located 0.8 and 1.2 kb 5' to the transcription start site of the human CBS and rat Cbs genes respectively, were identified by ChIP assays. A 49-bp human sequence, which encompassed an inverted repeat of the core HIF-binding site, functioned as a hypoxia-response element in luciferase reporter transcription assays. Thus HIFs mediate tissue-specific CBS expression, which may augment cerebral vasodilation as an adaptive response to chronic hypoxia.

Indexed as

Gene Expression Regulation, EnzymologicAnimalsBasic Helix-Loop-Helix ProteinsBrainCells, CulturedCystathionine beta-SynthaseHEK293 CellsHumansHypoxia, BrainHypoxia-Inducible Factor 1MalePC12 CellsRatsRats, Sprague-DawleyRats, WistarTissue DistributionBasic Helix-Loop-Helix ProteinsCystathionine beta-SynthaseHypoxia-Inducible Factor 1

Identifiers

PMID24328859
PMCPMC4374488
OpenAlexW1991790618

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.