Evidence map›Paper›PMID 24326589›Full record

ArticleThe Plant cell2013

Phosphatidylinositol 4,5-bisphosphate influences PIN polarization by controlling clathrin-mediated membrane trafficking in Arabidopsis.

Till Ischebeck, Stephanie Werner, Praveen Krishnamoorthy, Jennifer Lerche, Mónica Meijón, Irene Stenzel, Christian Löfke, Theresa Wiessner, Yang Ju Im, Imara Y Perera and 8 more

Open access · greenAbstract read
In one paragraph

Article in The Plant cell, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 72 papers.

0numbers the graph read from it
0cells of the map it votes in
72citing papers in PubMed
20.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

72 citing papers in PubMed, 162 citations in OpenAlex.

  1. Article
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  10. Article
  11. Mitochondrial GPAT-derived LPA controls auxin-dependent embryonic and postembryonic development.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  12. Article
  13. Leveraging orthology within maize and Arabidopsis QTL to identify genes affecting natural variation in gravitropism.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  14. TheeLife · 2022
    Article
  15. Article
  16. Article
  17. Review
  18. Review
  19. Article
  20. Phospholipids in Salt Stress Response.Plants (Basel, Switzerland) · 2021
    Review

12 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 6 institutions in 3 countries.

Till IschebeckDepartment of Plant Biochemistry, Albrecht-von-Haller-Institute for Plant Sciences, Georg-August-University Göttingen, 37077 Goettingen, Germany.
Stephanie Werner
Praveen Krishnamoorthy
Jennifer Lerche
Mónica Meijón
Irene Stenzel
Christian Löfke
Theresa Wiessner
Yang Ju Im
Imara Y Perera
Tim Iven
Ivo Feussner
Wolfgang Busch
Wendy F Boss
Thomas Teichmann
Bettina Hause
Staffan Persson
Ingo Heilmann
University of Göttingen · DENorth Carolina State University · USGregor Mendel Institute of Molecular Plant Biology · ATLeibniz Institute of Plant Biochemistry · DEMax Planck Society · DEMartin Luther University Halle-Wittenberg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The functions of the minor phospholipid phosphatidylinositol-4,5-bisphosphate [PtdIns(4,5)P2] during vegetative plant growth remain obscure. Here, we targeted two related phosphatidylinositol 4-phosphate 5-kinases (PI4P 5-kinases) PIP5K1 and PIP5K2, which are expressed ubiquitously in Arabidopsis thaliana. A pip5k1 pip5k2 double mutant with reduced PtdIns(4,5)P2 levels showed dwarf stature and phenotypes suggesting defects in auxin distribution. The roots of the pip5k1 pip5k2 double mutant had normal auxin levels but reduced auxin transport and altered distribution. Fluorescence-tagged auxin efflux carriers PIN-FORMED (PIN1)-green fluorescent protein (GFP) and PIN2-GFP displayed abnormal, partially apolar distribution. Furthermore, fewer brefeldin A-induced endosomal bodies decorated by PIN1-GFP or PIN2-GFP formed in pip5k1 pip5k2 mutants. Inducible overexpressor lines for PIP5K1 or PIP5K2 also exhibited phenotypes indicating misregulation of auxin-dependent processes, and immunolocalization showed reduced membrane association of PIN1 and PIN2. PIN cycling and polarization require clathrin-mediated endocytosis and labeled clathrin light chain also displayed altered localization patterns in the pip5k1 pip5k2 double mutant, consistent with a role for PtdIns(4,5)P2 in the regulation of clathrin-mediated endocytosis. Further biochemical tests on subcellular fractions enriched for clathrin-coated vesicles (CCVs) indicated that pip5k1 and pip5k2 mutants have reduced CCV-associated PI4P 5-kinase activity. Together, the data indicate an important role for PtdIns(4,5)P2 in the control of clathrin dynamics and in auxin distribution in Arabidopsis.

Indexed as

Biological TransportArabidopsisArabidopsis ProteinsCell PolarityClathrin-Coated VesiclesEndocytosisGreen Fluorescent ProteinsIndoleacetic AcidsMembrane Transport ProteinsMutationPhenotypePhosphatidylinositol 4,5-DiphosphatePhosphotransferases (Alcohol Group Acceptor)1-phosphatidylinositol-4-phosphate 5-kinaseArabidopsis ProteinsAT5G57090 protein, ArabidopsisGreen Fluorescent ProteinsIndoleacetic AcidsMembrane Transport ProteinsPhosphatidylinositol 4,5-DiphosphatePhosphotransferases (Alcohol Group Acceptor)PIN1 protein, Arabidopsis

Identifiers

PMID24326589
PMCPMC3903994
OpenAlexW2127171053

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.